Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6-5A0A075B6B5 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Trav6-5A0A075B6B5 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6-5A0A075B6B5 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6-5A0A075B6B5 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6-5A0A075B6B5 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6-5A0A075B6B5 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6-5A0A075B6B5 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6-5A0A075B6B5 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6-5A0A075B6B5 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6-5A0A075B6B5 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6-5A0A075B6B5 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6-5A0A075B6B5 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Trav6-5A0A075B6B5 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6-5A0A075B6B5 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6-5A0A075B6B5 Gm13168-201ENSMUST00000121771 632 ntBASIC11.48□□□□□ -0.57
Trav6-5A0A075B6B5 Gm11860-201ENSMUST00000122346 1010 ntBASIC11.48□□□□□ -0.57
Trav6-5A0A075B6B5 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC11.48□□□□□ -0.57
Trav6-5A0A075B6B5 Gm45058-201ENSMUST00000205810 766 ntBASIC11.48□□□□□ -0.57
Trav6-5A0A075B6B5 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6-5A0A075B6B5 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6-5A0A075B6B5 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6-5A0A075B6B5 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6-5A0A075B6B5 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav6-5A0A075B6B5 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6-5A0A075B6B5 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6-5A0A075B6B5 Gm11405-201ENSMUST00000118689 1556 ntBASIC11.48□□□□□ -0.57
Trav6-5A0A075B6B5 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav6-5A0A075B6B5 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6-5A0A075B6B5 AC126250.1-201ENSMUST00000228343 1768 ntBASIC11.48□□□□□ -0.57
Trav6-5A0A075B6B5 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6-5A0A075B6B5 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6-5A0A075B6B5 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6-5A0A075B6B5 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6-5A0A075B6B5 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC11.48□□□□□ -0.57
Trav6-5A0A075B6B5 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6-5A0A075B6B5 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6-5A0A075B6B5 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6-5A0A075B6B5 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6-5A0A075B6B5 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6-5A0A075B6B5 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Trav6-5A0A075B6B5 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6-5A0A075B6B5 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC11.47□□□□□ -0.57
Trav6-5A0A075B6B5 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6-5A0A075B6B5 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6-5A0A075B6B5 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6-5A0A075B6B5 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6-5A0A075B6B5 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6-5A0A075B6B5 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trav6-5A0A075B6B5 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6-5A0A075B6B5 Gm7901-201ENSMUST00000120430 1597 ntBASIC11.47□□□□□ -0.57
Trav6-5A0A075B6B5 Gm14451-201ENSMUST00000121581 1542 ntBASIC11.47□□□□□ -0.57
Trav6-5A0A075B6B5 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6-5A0A075B6B5 AC134329.2-201ENSMUST00000217897 428 ntBASIC11.47□□□□□ -0.57
Trav6-5A0A075B6B5 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6-5A0A075B6B5 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6-5A0A075B6B5 Gm5417-201ENSMUST00000079706 384 ntBASIC11.47□□□□□ -0.57
Trav6-5A0A075B6B5 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trav6-5A0A075B6B5 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6-5A0A075B6B5 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6-5A0A075B6B5 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trav6-5A0A075B6B5 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6-5A0A075B6B5 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6-5A0A075B6B5 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6-5A0A075B6B5 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6-5A0A075B6B5 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6-5A0A075B6B5 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6-5A0A075B6B5 Gm29361-201ENSMUST00000183323 2000 ntBASIC11.47□□□□□ -0.57
Trav6-5A0A075B6B5 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6-5A0A075B6B5 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6-5A0A075B6B5 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6-5A0A075B6B5 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6-5A0A075B6B5 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6-5A0A075B6B5 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6-5A0A075B6B5 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC11.46□□□□□ -0.57
Trav6-5A0A075B6B5 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6-5A0A075B6B5 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6-5A0A075B6B5 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6-5A0A075B6B5 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Trav6-5A0A075B6B5 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC11.46□□□□□ -0.57
Trav6-5A0A075B6B5 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6-5A0A075B6B5 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6-5A0A075B6B5 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6-5A0A075B6B5 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6-5A0A075B6B5 Gm45003-201ENSMUST00000205875 2158 ntBASIC11.46□□□□□ -0.57
Trav6-5A0A075B6B5 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6-5A0A075B6B5 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC11.46□□□□□ -0.57
Trav6-5A0A075B6B5 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6-5A0A075B6B5 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6-5A0A075B6B5 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC11.46□□□□□ -0.57
Trav6-5A0A075B6B5 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC11.46□□□□□ -0.57
Trav6-5A0A075B6B5 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC11.46□□□□□ -0.57
Trav6-5A0A075B6B5 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC11.46□□□□□ -0.57
Trav6-5A0A075B6B5 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6-5A0A075B6B5 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Trav6-5A0A075B6B5 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6-5A0A075B6B5 Gm6198-201ENSMUST00000191337 2929 ntBASIC11.46□□□□□ -0.57
Trav6-5A0A075B6B5 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6-5A0A075B6B5 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6-5A0A075B6B5 Gm43056-201ENSMUST00000197865 2791 ntBASIC11.46□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms