Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC11.42□□□□□ -0.58
Trav6-4A0A075B6B4 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6-4A0A075B6B4 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6-4A0A075B6B4 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC11.42□□□□□ -0.58
Trav6-4A0A075B6B4 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6-4A0A075B6B4 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC11.42□□□□□ -0.58
Trav6-4A0A075B6B4 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC11.42□□□□□ -0.58
Trav6-4A0A075B6B4 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Trav6-4A0A075B6B4 Thap2-203ENSMUST00000218989 527 ntBASIC11.42□□□□□ -0.58
Trav6-4A0A075B6B4 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6-4A0A075B6B4 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC11.42□□□□□ -0.58
Trav6-4A0A075B6B4 Gm10154-201ENSMUST00000084445 354 ntBASIC11.42□□□□□ -0.58
Trav6-4A0A075B6B4 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6-4A0A075B6B4 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6-4A0A075B6B4 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6-4A0A075B6B4 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Trav6-4A0A075B6B4 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6-4A0A075B6B4 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6-4A0A075B6B4 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6-4A0A075B6B4 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6-4A0A075B6B4 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6-4A0A075B6B4 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC11.42□□□□□ -0.58
Trav6-4A0A075B6B4 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Trav6-4A0A075B6B4 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Trav6-4A0A075B6B4 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6-4A0A075B6B4 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Trav6-4A0A075B6B4 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC11.41□□□□□ -0.58
Trav6-4A0A075B6B4 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC11.41□□□□□ -0.58
Trav6-4A0A075B6B4 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6-4A0A075B6B4 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6-4A0A075B6B4 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6-4A0A075B6B4 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6-4A0A075B6B4 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trav6-4A0A075B6B4 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6-4A0A075B6B4 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6-4A0A075B6B4 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav6-4A0A075B6B4 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6-4A0A075B6B4 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6-4A0A075B6B4 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC11.41□□□□□ -0.58
Trav6-4A0A075B6B4 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC11.41□□□□□ -0.58
Trav6-4A0A075B6B4 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
Trav6-4A0A075B6B4 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6-4A0A075B6B4 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC11.41□□□□□ -0.58
Trav6-4A0A075B6B4 Gm17271-201ENSMUST00000165535 355 ntBASIC11.41□□□□□ -0.58
Trav6-4A0A075B6B4 Mir3113-201ENSMUST00000175478 76 ntBASIC11.41□□□□□ -0.58
Trav6-4A0A075B6B4 Gm27301-201ENSMUST00000184012 127 ntBASIC11.41□□□□□ -0.58
Trav6-4A0A075B6B4 Gm8000-201ENSMUST00000188378 592 ntBASIC11.41□□□□□ -0.58
Trav6-4A0A075B6B4 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav6-4A0A075B6B4 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC11.41□□□□□ -0.58
Trav6-4A0A075B6B4 AC154572.2-201ENSMUST00000225105 997 ntBASIC11.41□□□□□ -0.58
Trav6-4A0A075B6B4 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6-4A0A075B6B4 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6-4A0A075B6B4 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6-4A0A075B6B4 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6-4A0A075B6B4 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6-4A0A075B6B4 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6-4A0A075B6B4 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6-4A0A075B6B4 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6-4A0A075B6B4 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6-4A0A075B6B4 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav6-4A0A075B6B4 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6-4A0A075B6B4 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6-4A0A075B6B4 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6-4A0A075B6B4 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
Trav6-4A0A075B6B4 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6-4A0A075B6B4 Gm8096-201ENSMUST00000209921 1591 ntBASIC11.41□□□□□ -0.58
Trav6-4A0A075B6B4 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trav6-4A0A075B6B4 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6-4A0A075B6B4 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6-4A0A075B6B4 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6-4A0A075B6B4 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6-4A0A075B6B4 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6-4A0A075B6B4 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6-4A0A075B6B4 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6-4A0A075B6B4 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6-4A0A075B6B4 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6-4A0A075B6B4 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6-4A0A075B6B4 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6-4A0A075B6B4 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6-4A0A075B6B4 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Trav6-4A0A075B6B4 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6-4A0A075B6B4 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6-4A0A075B6B4 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6-4A0A075B6B4 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6-4A0A075B6B4 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Trav6-4A0A075B6B4 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC11.4□□□□□ -0.58
Trav6-4A0A075B6B4 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Trav6-4A0A075B6B4 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6-4A0A075B6B4 Gm5177-201ENSMUST00000183092 997 ntBASIC11.4□□□□□ -0.58
Trav6-4A0A075B6B4 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC11.4□□□□□ -0.58
Trav6-4A0A075B6B4 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC11.4□□□□□ -0.58
Trav6-4A0A075B6B4 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC11.4□□□□□ -0.58
Trav6-4A0A075B6B4 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6-4A0A075B6B4 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6-4A0A075B6B4 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6-4A0A075B6B4 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6-4A0A075B6B4 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6-4A0A075B6B4 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6-4A0A075B6B4 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6-4A0A075B6B4 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms