Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC11.09□□□□□ -0.63
Trav6n-6A0A075B6B2 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav6n-6A0A075B6B2 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav6n-6A0A075B6B2 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav6n-6A0A075B6B2 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav6n-6A0A075B6B2 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav6n-6A0A075B6B2 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav6n-6A0A075B6B2 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav6n-6A0A075B6B2 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Trav6n-6A0A075B6B2 Gm15165-201ENSMUST00000118140 502 ntBASIC11.09□□□□□ -0.63
Trav6n-6A0A075B6B2 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav6n-6A0A075B6B2 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC11.09□□□□□ -0.63
Trav6n-6A0A075B6B2 Gm23547-201ENSMUST00000158210 271 ntBASIC11.09□□□□□ -0.63
Trav6n-6A0A075B6B2 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC11.09□□□□□ -0.63
Trav6n-6A0A075B6B2 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC11.09□□□□□ -0.63
Trav6n-6A0A075B6B2 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav6n-6A0A075B6B2 Gm10459-201ENSMUST00000202708 1155 ntBASIC11.09□□□□□ -0.63
Trav6n-6A0A075B6B2 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC11.09□□□□□ -0.63
Trav6n-6A0A075B6B2 AC127349.1-201ENSMUST00000224590 266 ntBASIC11.09□□□□□ -0.63
Trav6n-6A0A075B6B2 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav6n-6A0A075B6B2 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav6n-6A0A075B6B2 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav6n-6A0A075B6B2 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav6n-6A0A075B6B2 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav6n-6A0A075B6B2 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Trav6n-6A0A075B6B2 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav6n-6A0A075B6B2 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav6n-6A0A075B6B2 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav6n-6A0A075B6B2 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC11.09□□□□□ -0.63
Trav6n-6A0A075B6B2 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav6n-6A0A075B6B2 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav6n-6A0A075B6B2 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav6n-6A0A075B6B2 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav6n-6A0A075B6B2 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
Trav6n-6A0A075B6B2 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC11.08□□□□□ -0.63
Trav6n-6A0A075B6B2 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.63
Trav6n-6A0A075B6B2 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Trav6n-6A0A075B6B2 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav6n-6A0A075B6B2 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav6n-6A0A075B6B2 Gm42471-201ENSMUST00000201457 1865 ntBASIC11.08□□□□□ -0.64
Trav6n-6A0A075B6B2 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav6n-6A0A075B6B2 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav6n-6A0A075B6B2 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav6n-6A0A075B6B2 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav6n-6A0A075B6B2 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav6n-6A0A075B6B2 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav6n-6A0A075B6B2 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav6n-6A0A075B6B2 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav6n-6A0A075B6B2 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav6n-6A0A075B6B2 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Trav6n-6A0A075B6B2 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav6n-6A0A075B6B2 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav6n-6A0A075B6B2 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav6n-6A0A075B6B2 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Trav6n-6A0A075B6B2 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav6n-6A0A075B6B2 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Trav6n-6A0A075B6B2 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav6n-6A0A075B6B2 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
Trav6n-6A0A075B6B2 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC11.08□□□□□ -0.64
Trav6n-6A0A075B6B2 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav6n-6A0A075B6B2 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC11.08□□□□□ -0.64
Trav6n-6A0A075B6B2 Mir6404-201ENSMUST00000183699 94 ntBASIC11.08□□□□□ -0.64
Trav6n-6A0A075B6B2 Gm9172-201ENSMUST00000212092 954 ntBASIC11.08□□□□□ -0.64
Trav6n-6A0A075B6B2 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC11.08□□□□□ -0.64
Trav6n-6A0A075B6B2 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC11.08□□□□□ -0.64
Trav6n-6A0A075B6B2 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav6n-6A0A075B6B2 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav6n-6A0A075B6B2 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav6n-6A0A075B6B2 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav6n-6A0A075B6B2 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav6n-6A0A075B6B2 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav6n-6A0A075B6B2 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav6n-6A0A075B6B2 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
Trav6n-6A0A075B6B2 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav6n-6A0A075B6B2 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav6n-6A0A075B6B2 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav6n-6A0A075B6B2 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav6n-6A0A075B6B2 Gm28182-201ENSMUST00000188354 2477 ntBASIC11.08□□□□□ -0.64
Trav6n-6A0A075B6B2 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav6n-6A0A075B6B2 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav6n-6A0A075B6B2 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav6n-6A0A075B6B2 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Trav6n-6A0A075B6B2 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav6n-6A0A075B6B2 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav6n-6A0A075B6B2 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav6n-6A0A075B6B2 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Trav6n-6A0A075B6B2 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav6n-6A0A075B6B2 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav6n-6A0A075B6B2 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav6n-6A0A075B6B2 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav6n-6A0A075B6B2 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
Trav6n-6A0A075B6B2 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav6n-6A0A075B6B2 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav6n-6A0A075B6B2 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav6n-6A0A075B6B2 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC11.07□□□□□ -0.64
Trav6n-6A0A075B6B2 Gm43364-201ENSMUST00000196046 3274 ntBASIC11.07□□□□□ -0.64
Trav6n-6A0A075B6B2 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav6n-6A0A075B6B2 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Trav6n-6A0A075B6B2 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Trav6n-6A0A075B6B2 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms