Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav8-1A0A075B641 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav8-1A0A075B641 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav8-1A0A075B641 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav8-1A0A075B641 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav8-1A0A075B641 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav8-1A0A075B641 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC10.65□□□□□ -0.7
Trav8-1A0A075B641 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav8-1A0A075B641 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC10.65□□□□□ -0.7
Trav8-1A0A075B641 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
Trav8-1A0A075B641 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav8-1A0A075B641 Arhgef4-208ENSMUST00000211073 171 ntBASIC10.65□□□□□ -0.7
Trav8-1A0A075B641 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav8-1A0A075B641 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Trav8-1A0A075B641 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav8-1A0A075B641 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav8-1A0A075B641 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav8-1A0A075B641 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC10.65□□□□□ -0.7
Trav8-1A0A075B641 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Trav8-1A0A075B641 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav8-1A0A075B641 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.71
Trav8-1A0A075B641 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav8-1A0A075B641 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav8-1A0A075B641 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.71
Trav8-1A0A075B641 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav8-1A0A075B641 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav8-1A0A075B641 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC10.65□□□□□ -0.71
Trav8-1A0A075B641 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC10.65□□□□□ -0.71
Trav8-1A0A075B641 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.71
Trav8-1A0A075B641 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Trav8-1A0A075B641 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav8-1A0A075B641 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav8-1A0A075B641 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav8-1A0A075B641 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav8-1A0A075B641 AC166491.1-201ENSMUST00000227053 2308 ntBASIC10.64□□□□□ -0.71
Trav8-1A0A075B641 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav8-1A0A075B641 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav8-1A0A075B641 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav8-1A0A075B641 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav8-1A0A075B641 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav8-1A0A075B641 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Trav8-1A0A075B641 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav8-1A0A075B641 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav8-1A0A075B641 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav8-1A0A075B641 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav8-1A0A075B641 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav8-1A0A075B641 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Trav8-1A0A075B641 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC10.64□□□□□ -0.71
Trav8-1A0A075B641 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav8-1A0A075B641 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC10.64□□□□□ -0.71
Trav8-1A0A075B641 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Trav8-1A0A075B641 Gm29707-201ENSMUST00000196325 491 ntBASIC10.64□□□□□ -0.71
Trav8-1A0A075B641 Gm43353-201ENSMUST00000199224 1295 ntBASIC10.64□□□□□ -0.71
Trav8-1A0A075B641 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC10.64□□□□□ -0.71
Trav8-1A0A075B641 Gm30437-201ENSMUST00000206086 1201 ntBASIC10.64□□□□□ -0.71
Trav8-1A0A075B641 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav8-1A0A075B641 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav8-1A0A075B641 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav8-1A0A075B641 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav8-1A0A075B641 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav8-1A0A075B641 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav8-1A0A075B641 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav8-1A0A075B641 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav8-1A0A075B641 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav8-1A0A075B641 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC10.64□□□□□ -0.71
Trav8-1A0A075B641 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav8-1A0A075B641 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav8-1A0A075B641 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav8-1A0A075B641 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC10.64□□□□□ -0.71
Trav8-1A0A075B641 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav8-1A0A075B641 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav8-1A0A075B641 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav8-1A0A075B641 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC10.64□□□□□ -0.71
Trav8-1A0A075B641 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav8-1A0A075B641 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav8-1A0A075B641 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC10.64□□□□□ -0.71
Trav8-1A0A075B641 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC10.64□□□□□ -0.71
Trav8-1A0A075B641 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav8-1A0A075B641 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav8-1A0A075B641 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Trav8-1A0A075B641 Gm43056-201ENSMUST00000197865 2791 ntBASIC10.64□□□□□ -0.71
Trav8-1A0A075B641 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC10.64□□□□□ -0.71
Trav8-1A0A075B641 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC10.64□□□□□ -0.71
Trav8-1A0A075B641 Carlr-201ENSMUST00000181515 2574 ntBASIC10.64□□□□□ -0.71
Trav8-1A0A075B641 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav8-1A0A075B641 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Trav8-1A0A075B641 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav8-1A0A075B641 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav8-1A0A075B641 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC10.63□□□□□ -0.71
Trav8-1A0A075B641 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav8-1A0A075B641 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav8-1A0A075B641 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC10.63□□□□□ -0.71
Trav8-1A0A075B641 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav8-1A0A075B641 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC10.63□□□□□ -0.71
Trav8-1A0A075B641 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav8-1A0A075B641 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav8-1A0A075B641 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav8-1A0A075B641 Gm42632-201ENSMUST00000201707 2411 ntBASIC10.63□□□□□ -0.71
Trav8-1A0A075B641 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav8-1A0A075B641 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms