Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav16d-dv11A0A075B617 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav16d-dv11A0A075B617 AC166574.6-201ENSMUST00000227889 1806 ntBASIC10.91□□□□□ -0.66
Trav16d-dv11A0A075B617 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav16d-dv11A0A075B617 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav16d-dv11A0A075B617 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav16d-dv11A0A075B617 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav16d-dv11A0A075B617 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Trav16d-dv11A0A075B617 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Trav16d-dv11A0A075B617 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
Trav16d-dv11A0A075B617 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav16d-dv11A0A075B617 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav16d-dv11A0A075B617 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Trav16d-dv11A0A075B617 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Trav16d-dv11A0A075B617 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC10.91□□□□□ -0.66
Trav16d-dv11A0A075B617 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav16d-dv11A0A075B617 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC10.91□□□□□ -0.66
Trav16d-dv11A0A075B617 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav16d-dv11A0A075B617 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC10.91□□□□□ -0.66
Trav16d-dv11A0A075B617 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC10.91□□□□□ -0.66
Trav16d-dv11A0A075B617 AC164629.5-201ENSMUST00000220387 632 ntBASIC10.91□□□□□ -0.66
Trav16d-dv11A0A075B617 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav16d-dv11A0A075B617 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav16d-dv11A0A075B617 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav16d-dv11A0A075B617 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav16d-dv11A0A075B617 Gm44981-201ENSMUST00000205549 1943 ntBASIC10.91□□□□□ -0.66
Trav16d-dv11A0A075B617 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav16d-dv11A0A075B617 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav16d-dv11A0A075B617 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav16d-dv11A0A075B617 Gm43195-201ENSMUST00000200614 2332 ntBASIC10.91□□□□□ -0.66
Trav16d-dv11A0A075B617 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav16d-dv11A0A075B617 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav16d-dv11A0A075B617 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav16d-dv11A0A075B617 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav16d-dv11A0A075B617 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav16d-dv11A0A075B617 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav16d-dv11A0A075B617 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav16d-dv11A0A075B617 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav16d-dv11A0A075B617 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC10.9□□□□□ -0.66
Trav16d-dv11A0A075B617 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav16d-dv11A0A075B617 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav16d-dv11A0A075B617 AC153366.2-201ENSMUST00000219461 1984 ntBASIC10.9□□□□□ -0.66
Trav16d-dv11A0A075B617 AC164107.1-201ENSMUST00000227730 2161 ntBASIC10.9□□□□□ -0.66
Trav16d-dv11A0A075B617 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC10.9□□□□□ -0.66
Trav16d-dv11A0A075B617 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav16d-dv11A0A075B617 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC10.9□□□□□ -0.66
Trav16d-dv11A0A075B617 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav16d-dv11A0A075B617 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav16d-dv11A0A075B617 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.66
Trav16d-dv11A0A075B617 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav16d-dv11A0A075B617 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav16d-dv11A0A075B617 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC10.9□□□□□ -0.66
Trav16d-dv11A0A075B617 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC10.9□□□□□ -0.66
Trav16d-dv11A0A075B617 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav16d-dv11A0A075B617 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Trav16d-dv11A0A075B617 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav16d-dv11A0A075B617 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC10.9□□□□□ -0.66
Trav16d-dv11A0A075B617 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav16d-dv11A0A075B617 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav16d-dv11A0A075B617 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav16d-dv11A0A075B617 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav16d-dv11A0A075B617 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trav16d-dv11A0A075B617 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trav16d-dv11A0A075B617 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Trav16d-dv11A0A075B617 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trav16d-dv11A0A075B617 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trav16d-dv11A0A075B617 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trav16d-dv11A0A075B617 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trav16d-dv11A0A075B617 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trav16d-dv11A0A075B617 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Trav16d-dv11A0A075B617 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Trav16d-dv11A0A075B617 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav16d-dv11A0A075B617 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Trav16d-dv11A0A075B617 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC10.89□□□□□ -0.67
Trav16d-dv11A0A075B617 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav16d-dv11A0A075B617 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Trav16d-dv11A0A075B617 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav16d-dv11A0A075B617 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav16d-dv11A0A075B617 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav16d-dv11A0A075B617 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav16d-dv11A0A075B617 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav16d-dv11A0A075B617 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav16d-dv11A0A075B617 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav16d-dv11A0A075B617 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav16d-dv11A0A075B617 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav16d-dv11A0A075B617 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav16d-dv11A0A075B617 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav16d-dv11A0A075B617 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav16d-dv11A0A075B617 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Trav16d-dv11A0A075B617 Gm25406-201ENSMUST00000157599 105 ntBASIC10.89□□□□□ -0.67
Trav16d-dv11A0A075B617 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav16d-dv11A0A075B617 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Trav16d-dv11A0A075B617 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC10.89□□□□□ -0.67
Trav16d-dv11A0A075B617 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC10.89□□□□□ -0.67
Trav16d-dv11A0A075B617 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav16d-dv11A0A075B617 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Trav16d-dv11A0A075B617 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav16d-dv11A0A075B617 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav16d-dv11A0A075B617 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Trav16d-dv11A0A075B617 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms