Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6-1A0A075B5Z8 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6-1A0A075B5Z8 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Trav6-1A0A075B5Z8 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Trav6-1A0A075B5Z8 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Trav6-1A0A075B5Z8 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6-1A0A075B5Z8 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6-1A0A075B5Z8 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6-1A0A075B5Z8 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6-1A0A075B5Z8 AC166574.6-201ENSMUST00000227889 1806 ntBASIC11.92□□□□□ -0.5
Trav6-1A0A075B5Z8 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC11.92□□□□□ -0.5
Trav6-1A0A075B5Z8 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6-1A0A075B5Z8 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6-1A0A075B5Z8 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC11.92□□□□□ -0.5
Trav6-1A0A075B5Z8 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trav6-1A0A075B5Z8 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6-1A0A075B5Z8 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6-1A0A075B5Z8 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6-1A0A075B5Z8 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6-1A0A075B5Z8 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC11.92□□□□□ -0.5
Trav6-1A0A075B5Z8 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6-1A0A075B5Z8 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-1A0A075B5Z8 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-1A0A075B5Z8 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-1A0A075B5Z8 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trav6-1A0A075B5Z8 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-1A0A075B5Z8 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-1A0A075B5Z8 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav6-1A0A075B5Z8 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-1A0A075B5Z8 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav6-1A0A075B5Z8 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC11.91□□□□□ -0.5
Trav6-1A0A075B5Z8 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-1A0A075B5Z8 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-1A0A075B5Z8 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-1A0A075B5Z8 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-1A0A075B5Z8 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-1A0A075B5Z8 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-1A0A075B5Z8 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-1A0A075B5Z8 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Trav6-1A0A075B5Z8 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-1A0A075B5Z8 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav6-1A0A075B5Z8 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Trav6-1A0A075B5Z8 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-1A0A075B5Z8 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-1A0A075B5Z8 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-1A0A075B5Z8 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-1A0A075B5Z8 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-1A0A075B5Z8 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Trav6-1A0A075B5Z8 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-1A0A075B5Z8 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-1A0A075B5Z8 Gm14451-201ENSMUST00000121581 1542 ntBASIC11.91□□□□□ -0.5
Trav6-1A0A075B5Z8 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Trav6-1A0A075B5Z8 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-1A0A075B5Z8 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-1A0A075B5Z8 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Trav6-1A0A075B5Z8 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-1A0A075B5Z8 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-1A0A075B5Z8 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-1A0A075B5Z8 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-1A0A075B5Z8 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-1A0A075B5Z8 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-1A0A075B5Z8 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-1A0A075B5Z8 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-1A0A075B5Z8 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
Trav6-1A0A075B5Z8 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-1A0A075B5Z8 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-1A0A075B5Z8 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC11.9□□□□□ -0.5
Trav6-1A0A075B5Z8 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-1A0A075B5Z8 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-1A0A075B5Z8 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Trav6-1A0A075B5Z8 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC11.9□□□□□ -0.5
Trav6-1A0A075B5Z8 Gm2308-201ENSMUST00000166539 1004 ntBASIC11.9□□□□□ -0.5
Trav6-1A0A075B5Z8 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Trav6-1A0A075B5Z8 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-1A0A075B5Z8 Gm27357-201ENSMUST00000183754 135 ntBASIC11.9□□□□□ -0.5
Trav6-1A0A075B5Z8 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-1A0A075B5Z8 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-1A0A075B5Z8 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC11.9□□□□□ -0.5
Trav6-1A0A075B5Z8 Gm5184-201ENSMUST00000220417 1702 ntBASIC11.9□□□□□ -0.5
Trav6-1A0A075B5Z8 Rbfox2-207ENSMUST00000227533 1041 ntBASIC11.9□□□□□ -0.5
Trav6-1A0A075B5Z8 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-1A0A075B5Z8 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-1A0A075B5Z8 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-1A0A075B5Z8 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Trav6-1A0A075B5Z8 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Trav6-1A0A075B5Z8 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-1A0A075B5Z8 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-1A0A075B5Z8 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-1A0A075B5Z8 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Trav6-1A0A075B5Z8 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-1A0A075B5Z8 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Trav6-1A0A075B5Z8 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Trav6-1A0A075B5Z8 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav6-1A0A075B5Z8 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Trav6-1A0A075B5Z8 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav6-1A0A075B5Z8 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav6-1A0A075B5Z8 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav6-1A0A075B5Z8 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trav6-1A0A075B5Z8 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-1A0A075B5Z8 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms