Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv4A0A075B5I2 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv4A0A075B5I2 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.85□□□□□ -0.03
Trbv4A0A075B5I2 Gm16026-204ENSMUST00000162652 683 ntBASIC14.85□□□□□ -0.03
Trbv4A0A075B5I2 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv4A0A075B5I2 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trbv4A0A075B5I2 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv4A0A075B5I2 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv4A0A075B5I2 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv4A0A075B5I2 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv4A0A075B5I2 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv4A0A075B5I2 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv4A0A075B5I2 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv4A0A075B5I2 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv4A0A075B5I2 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.85□□□□□ -0.03
Trbv4A0A075B5I2 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.85□□□□□ -0.03
Trbv4A0A075B5I2 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv4A0A075B5I2 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv4A0A075B5I2 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv4A0A075B5I2 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv4A0A075B5I2 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trbv4A0A075B5I2 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv4A0A075B5I2 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.84□□□□□ -0.03
Trbv4A0A075B5I2 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv4A0A075B5I2 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv4A0A075B5I2 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv4A0A075B5I2 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv4A0A075B5I2 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv4A0A075B5I2 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv4A0A075B5I2 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.84□□□□□ -0.03
Trbv4A0A075B5I2 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv4A0A075B5I2 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv4A0A075B5I2 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv4A0A075B5I2 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trbv4A0A075B5I2 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trbv4A0A075B5I2 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv4A0A075B5I2 Gm9726-201ENSMUST00000180321 678 ntBASIC14.84□□□□□ -0.03
Trbv4A0A075B5I2 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv4A0A075B5I2 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv4A0A075B5I2 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv4A0A075B5I2 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv4A0A075B5I2 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv4A0A075B5I2 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.84□□□□□ -0.03
Trbv4A0A075B5I2 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trbv4A0A075B5I2 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
Trbv4A0A075B5I2 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv4A0A075B5I2 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv4A0A075B5I2 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trbv4A0A075B5I2 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Trbv4A0A075B5I2 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Trbv4A0A075B5I2 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Trbv4A0A075B5I2 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trbv4A0A075B5I2 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trbv4A0A075B5I2 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.83□□□□□ -0.03
Trbv4A0A075B5I2 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.83□□□□□ -0.03
Trbv4A0A075B5I2 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Trbv4A0A075B5I2 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trbv4A0A075B5I2 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Trbv4A0A075B5I2 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv4A0A075B5I2 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv4A0A075B5I2 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.83□□□□□ -0.04
Trbv4A0A075B5I2 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.04
Trbv4A0A075B5I2 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv4A0A075B5I2 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv4A0A075B5I2 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv4A0A075B5I2 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv4A0A075B5I2 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv4A0A075B5I2 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv4A0A075B5I2 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.83□□□□□ -0.04
Trbv4A0A075B5I2 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.83□□□□□ -0.04
Trbv4A0A075B5I2 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv4A0A075B5I2 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv4A0A075B5I2 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv4A0A075B5I2 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Trbv4A0A075B5I2 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv4A0A075B5I2 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Trbv4A0A075B5I2 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv4A0A075B5I2 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv4A0A075B5I2 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.83□□□□□ -0.04
Trbv4A0A075B5I2 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv4A0A075B5I2 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv4A0A075B5I2 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Trbv4A0A075B5I2 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv4A0A075B5I2 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv4A0A075B5I2 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Trbv4A0A075B5I2 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv4A0A075B5I2 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.83□□□□□ -0.04
Trbv4A0A075B5I2 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.83□□□□□ -0.04
Trbv4A0A075B5I2 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv4A0A075B5I2 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv4A0A075B5I2 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv4A0A075B5I2 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv4A0A075B5I2 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv4A0A075B5I2 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv4A0A075B5I2 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trbv4A0A075B5I2 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv4A0A075B5I2 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv4A0A075B5I2 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv4A0A075B5I2 Gm1401-201ENSMUST00000122048 772 ntBASIC14.82□□□□□ -0.04
Trbv4A0A075B5I2 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 95.8 ms