Protein–RNA interactions for Protein: Q9Z2L7

Crlf3, Cytokine receptor-like factor 3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf3Q9Z2L7 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Crlf3Q9Z2L7 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Crlf3Q9Z2L7 AC158538.2-201ENSMUST00000225455 906 ntBASIC15.04■□□□□ -0
Crlf3Q9Z2L7 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.04■□□□□ -0
Crlf3Q9Z2L7 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Crlf3Q9Z2L7 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Crlf3Q9Z2L7 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Crlf3Q9Z2L7 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Crlf3Q9Z2L7 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Crlf3Q9Z2L7 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Crlf3Q9Z2L7 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Crlf3Q9Z2L7 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Crlf3Q9Z2L7 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Crlf3Q9Z2L7 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC15.04■□□□□ -0
Crlf3Q9Z2L7 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Crlf3Q9Z2L7 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC15.03■□□□□ -0
Crlf3Q9Z2L7 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC15.03■□□□□ -0
Crlf3Q9Z2L7 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Crlf3Q9Z2L7 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Crlf3Q9Z2L7 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC15.03■□□□□ -0
Crlf3Q9Z2L7 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Crlf3Q9Z2L7 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
Crlf3Q9Z2L7 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Crlf3Q9Z2L7 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.03■□□□□ -0
Crlf3Q9Z2L7 Gm8344-201ENSMUST00000119813 856 ntBASIC15.03■□□□□ -0
Crlf3Q9Z2L7 Rprl3-201ENSMUST00000157400 290 ntBASIC15.03■□□□□ -0
Crlf3Q9Z2L7 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.03■□□□□ -0
Crlf3Q9Z2L7 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Crlf3Q9Z2L7 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Crlf3Q9Z2L7 Gm7461-201ENSMUST00000058918 827 ntBASIC15.03■□□□□ -0
Crlf3Q9Z2L7 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.03■□□□□ -0
Crlf3Q9Z2L7 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Crlf3Q9Z2L7 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC15.03■□□□□ -0
Crlf3Q9Z2L7 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Crlf3Q9Z2L7 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Crlf3Q9Z2L7 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Crlf3Q9Z2L7 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Crlf3Q9Z2L7 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Crlf3Q9Z2L7 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Crlf3Q9Z2L7 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Crlf3Q9Z2L7 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Crlf3Q9Z2L7 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC15.03■□□□□ -0
Crlf3Q9Z2L7 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Crlf3Q9Z2L7 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC15.02■□□□□ -0
Crlf3Q9Z2L7 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC15.02■□□□□ -0
Crlf3Q9Z2L7 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
Crlf3Q9Z2L7 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Crlf3Q9Z2L7 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC15.02■□□□□ -0
Crlf3Q9Z2L7 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Crlf3Q9Z2L7 AC159649.2-201ENSMUST00000222984 3223 ntBASIC15.02■□□□□ -0
Crlf3Q9Z2L7 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Crlf3Q9Z2L7 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Crlf3Q9Z2L7 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Crlf3Q9Z2L7 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC15.02■□□□□ -0
Crlf3Q9Z2L7 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Crlf3Q9Z2L7 Gm10710-201ENSMUST00000047876 3971 ntBASIC15.02■□□□□ -0
Crlf3Q9Z2L7 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC15.02■□□□□ -0
Crlf3Q9Z2L7 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC15.02■□□□□ -0
Crlf3Q9Z2L7 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Crlf3Q9Z2L7 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Crlf3Q9Z2L7 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Crlf3Q9Z2L7 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.02□□□□□ -0.01
Crlf3Q9Z2L7 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Crlf3Q9Z2L7 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Crlf3Q9Z2L7 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Crlf3Q9Z2L7 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Crlf3Q9Z2L7 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC15.02□□□□□ -0.01
Crlf3Q9Z2L7 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Crlf3Q9Z2L7 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Crlf3Q9Z2L7 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Crlf3Q9Z2L7 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Crlf3Q9Z2L7 Gm43399-201ENSMUST00000202546 2374 ntBASIC15.02□□□□□ -0.01
Crlf3Q9Z2L7 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Crlf3Q9Z2L7 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Crlf3Q9Z2L7 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Crlf3Q9Z2L7 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Crlf3Q9Z2L7 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Crlf3Q9Z2L7 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Crlf3Q9Z2L7 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Crlf3Q9Z2L7 Gm12008-201ENSMUST00000117791 755 ntBASIC15.01□□□□□ -0.01
Crlf3Q9Z2L7 Gm44454-201ENSMUST00000198541 138 ntBASIC15.01□□□□□ -0.01
Crlf3Q9Z2L7 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC15.01□□□□□ -0.01
Crlf3Q9Z2L7 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Crlf3Q9Z2L7 Gm18622-201ENSMUST00000219361 595 ntBASIC15.01□□□□□ -0.01
Crlf3Q9Z2L7 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Crlf3Q9Z2L7 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Crlf3Q9Z2L7 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Crlf3Q9Z2L7 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Crlf3Q9Z2L7 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC15.01□□□□□ -0.01
Crlf3Q9Z2L7 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Crlf3Q9Z2L7 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Crlf3Q9Z2L7 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Crlf3Q9Z2L7 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.01□□□□□ -0.01
Crlf3Q9Z2L7 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Crlf3Q9Z2L7 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Crlf3Q9Z2L7 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC15□□□□□ -0.01
Crlf3Q9Z2L7 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Crlf3Q9Z2L7 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Crlf3Q9Z2L7 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Crlf3Q9Z2L7 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms