Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cldn3Q9Z0G9 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Cldn3Q9Z0G9 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.04■□□□□ -0
Cldn3Q9Z0G9 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cldn3Q9Z0G9 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cldn3Q9Z0G9 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cldn3Q9Z0G9 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.04■□□□□ -0
Cldn3Q9Z0G9 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cldn3Q9Z0G9 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.04■□□□□ -0
Cldn3Q9Z0G9 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cldn3Q9Z0G9 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.04■□□□□ -0
Cldn3Q9Z0G9 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
Cldn3Q9Z0G9 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Cldn3Q9Z0G9 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cldn3Q9Z0G9 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cldn3Q9Z0G9 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cldn3Q9Z0G9 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cldn3Q9Z0G9 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cldn3Q9Z0G9 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
Cldn3Q9Z0G9 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Cldn3Q9Z0G9 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cldn3Q9Z0G9 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Cldn3Q9Z0G9 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Cldn3Q9Z0G9 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC15.03■□□□□ -0
Cldn3Q9Z0G9 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC15.03■□□□□ -0
Cldn3Q9Z0G9 Gm5177-201ENSMUST00000183092 997 ntBASIC15.03■□□□□ -0
Cldn3Q9Z0G9 Gm45683-201ENSMUST00000210825 1247 ntBASIC15.03■□□□□ -0
Cldn3Q9Z0G9 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cldn3Q9Z0G9 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cldn3Q9Z0G9 AC174742.1-201ENSMUST00000218272 304 ntBASIC15.03■□□□□ -0
Cldn3Q9Z0G9 Thap2-203ENSMUST00000218989 527 ntBASIC15.03■□□□□ -0
Cldn3Q9Z0G9 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cldn3Q9Z0G9 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cldn3Q9Z0G9 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Cldn3Q9Z0G9 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cldn3Q9Z0G9 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cldn3Q9Z0G9 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Cldn3Q9Z0G9 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
Cldn3Q9Z0G9 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Cldn3Q9Z0G9 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cldn3Q9Z0G9 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cldn3Q9Z0G9 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cldn3Q9Z0G9 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Cldn3Q9Z0G9 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC15.02■□□□□ -0
Cldn3Q9Z0G9 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cldn3Q9Z0G9 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
Cldn3Q9Z0G9 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cldn3Q9Z0G9 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cldn3Q9Z0G9 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cldn3Q9Z0G9 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cldn3Q9Z0G9 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cldn3Q9Z0G9 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cldn3Q9Z0G9 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Cldn3Q9Z0G9 Gm15467-201ENSMUST00000120582 445 ntBASIC15.02■□□□□ -0
Cldn3Q9Z0G9 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Cldn3Q9Z0G9 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC15.02■□□□□ -0
Cldn3Q9Z0G9 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Cldn3Q9Z0G9 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Cldn3Q9Z0G9 AC090659.1-201ENSMUST00000224334 768 ntBASIC15.02■□□□□ -0
Cldn3Q9Z0G9 AC154572.2-201ENSMUST00000225105 997 ntBASIC15.02■□□□□ -0
Cldn3Q9Z0G9 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.02■□□□□ -0
Cldn3Q9Z0G9 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cldn3Q9Z0G9 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Cldn3Q9Z0G9 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC15.02□□□□□ -0.01
Cldn3Q9Z0G9 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Cldn3Q9Z0G9 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cldn3Q9Z0G9 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.02□□□□□ -0.01
Cldn3Q9Z0G9 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cldn3Q9Z0G9 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cldn3Q9Z0G9 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cldn3Q9Z0G9 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cldn3Q9Z0G9 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cldn3Q9Z0G9 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cldn3Q9Z0G9 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Cldn3Q9Z0G9 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC15.02□□□□□ -0.01
Cldn3Q9Z0G9 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cldn3Q9Z0G9 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cldn3Q9Z0G9 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
Cldn3Q9Z0G9 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cldn3Q9Z0G9 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Cldn3Q9Z0G9 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.01□□□□□ -0.01
Cldn3Q9Z0G9 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cldn3Q9Z0G9 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cldn3Q9Z0G9 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cldn3Q9Z0G9 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cldn3Q9Z0G9 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.01□□□□□ -0.01
Cldn3Q9Z0G9 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cldn3Q9Z0G9 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC15.01□□□□□ -0.01
Cldn3Q9Z0G9 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cldn3Q9Z0G9 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cldn3Q9Z0G9 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC15.01□□□□□ -0.01
Cldn3Q9Z0G9 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC15.01□□□□□ -0.01
Cldn3Q9Z0G9 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.01□□□□□ -0.01
Cldn3Q9Z0G9 Gm44945-201ENSMUST00000206764 1187 ntBASIC15.01□□□□□ -0.01
Cldn3Q9Z0G9 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC15.01□□□□□ -0.01
Cldn3Q9Z0G9 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cldn3Q9Z0G9 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Cldn3Q9Z0G9 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Cldn3Q9Z0G9 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cldn3Q9Z0G9 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms