Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lhx9Q9WUH2 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Lhx9Q9WUH2 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.1□□□□□ -0.15
Lhx9Q9WUH2 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Lhx9Q9WUH2 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lhx9Q9WUH2 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lhx9Q9WUH2 Mir449b-201ENSMUST00000104833 80 ntBASIC14.1□□□□□ -0.15
Lhx9Q9WUH2 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lhx9Q9WUH2 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.1□□□□□ -0.15
Lhx9Q9WUH2 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lhx9Q9WUH2 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.1□□□□□ -0.15
Lhx9Q9WUH2 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.1□□□□□ -0.15
Lhx9Q9WUH2 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.1□□□□□ -0.15
Lhx9Q9WUH2 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.1□□□□□ -0.15
Lhx9Q9WUH2 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Lhx9Q9WUH2 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lhx9Q9WUH2 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lhx9Q9WUH2 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lhx9Q9WUH2 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.1□□□□□ -0.15
Lhx9Q9WUH2 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lhx9Q9WUH2 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lhx9Q9WUH2 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.1□□□□□ -0.15
Lhx9Q9WUH2 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lhx9Q9WUH2 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.1□□□□□ -0.15
Lhx9Q9WUH2 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lhx9Q9WUH2 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lhx9Q9WUH2 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lhx9Q9WUH2 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lhx9Q9WUH2 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lhx9Q9WUH2 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lhx9Q9WUH2 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lhx9Q9WUH2 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Lhx9Q9WUH2 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lhx9Q9WUH2 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lhx9Q9WUH2 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lhx9Q9WUH2 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lhx9Q9WUH2 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Lhx9Q9WUH2 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lhx9Q9WUH2 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Lhx9Q9WUH2 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lhx9Q9WUH2 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lhx9Q9WUH2 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.09□□□□□ -0.15
Lhx9Q9WUH2 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lhx9Q9WUH2 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lhx9Q9WUH2 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lhx9Q9WUH2 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lhx9Q9WUH2 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.09□□□□□ -0.15
Lhx9Q9WUH2 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC14.09□□□□□ -0.15
Lhx9Q9WUH2 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.09□□□□□ -0.15
Lhx9Q9WUH2 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.09□□□□□ -0.15
Lhx9Q9WUH2 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lhx9Q9WUH2 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lhx9Q9WUH2 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lhx9Q9WUH2 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lhx9Q9WUH2 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lhx9Q9WUH2 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
Lhx9Q9WUH2 Sybu-209ENSMUST00000228639 4113 ntBASIC14.09□□□□□ -0.15
Lhx9Q9WUH2 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lhx9Q9WUH2 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Lhx9Q9WUH2 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lhx9Q9WUH2 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Lhx9Q9WUH2 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lhx9Q9WUH2 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lhx9Q9WUH2 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lhx9Q9WUH2 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Lhx9Q9WUH2 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Lhx9Q9WUH2 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Lhx9Q9WUH2 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Lhx9Q9WUH2 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Lhx9Q9WUH2 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Lhx9Q9WUH2 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Lhx9Q9WUH2 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lhx9Q9WUH2 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Lhx9Q9WUH2 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lhx9Q9WUH2 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lhx9Q9WUH2 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lhx9Q9WUH2 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Lhx9Q9WUH2 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.08□□□□□ -0.16
Lhx9Q9WUH2 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.08□□□□□ -0.16
Lhx9Q9WUH2 Gm7774-201ENSMUST00000200064 533 ntBASIC14.08□□□□□ -0.16
Lhx9Q9WUH2 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.08□□□□□ -0.16
Lhx9Q9WUH2 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lhx9Q9WUH2 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lhx9Q9WUH2 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lhx9Q9WUH2 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lhx9Q9WUH2 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lhx9Q9WUH2 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lhx9Q9WUH2 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lhx9Q9WUH2 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.08□□□□□ -0.16
Lhx9Q9WUH2 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms