Protein–RNA interactions for Protein: Q9R1Q9

Atp6ap1, V-type proton ATPase subunit S1, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1Q9R1Q9 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Atp6ap1Q9R1Q9 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Atp6ap1Q9R1Q9 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.54□□□□□ -0.08
Atp6ap1Q9R1Q9 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Atp6ap1Q9R1Q9 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Atp6ap1Q9R1Q9 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Atp6ap1Q9R1Q9 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Atp6ap1Q9R1Q9 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Atp6ap1Q9R1Q9 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Atp6ap1Q9R1Q9 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Atp6ap1Q9R1Q9 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Atp6ap1Q9R1Q9 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Atp6ap1Q9R1Q9 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Atp6ap1Q9R1Q9 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Atp6ap1Q9R1Q9 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Atp6ap1Q9R1Q9 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Atp6ap1Q9R1Q9 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Atp6ap1Q9R1Q9 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Atp6ap1Q9R1Q9 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Atp6ap1Q9R1Q9 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Atp6ap1Q9R1Q9 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.53□□□□□ -0.08
Atp6ap1Q9R1Q9 Gm15467-201ENSMUST00000120582 445 ntBASIC14.53□□□□□ -0.08
Atp6ap1Q9R1Q9 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.53□□□□□ -0.08
Atp6ap1Q9R1Q9 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Atp6ap1Q9R1Q9 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.53□□□□□ -0.08
Atp6ap1Q9R1Q9 Mir8117-201ENSMUST00000184773 107 ntBASIC14.53□□□□□ -0.08
Atp6ap1Q9R1Q9 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.53□□□□□ -0.08
Atp6ap1Q9R1Q9 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Atp6ap1Q9R1Q9 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.53□□□□□ -0.08
Atp6ap1Q9R1Q9 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.53□□□□□ -0.08
Atp6ap1Q9R1Q9 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.53□□□□□ -0.08
Atp6ap1Q9R1Q9 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Atp6ap1Q9R1Q9 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Atp6ap1Q9R1Q9 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Atp6ap1Q9R1Q9 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Atp6ap1Q9R1Q9 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Atp6ap1Q9R1Q9 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Atp6ap1Q9R1Q9 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Atp6ap1Q9R1Q9 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Atp6ap1Q9R1Q9 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.52□□□□□ -0.08
Atp6ap1Q9R1Q9 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Atp6ap1Q9R1Q9 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Atp6ap1Q9R1Q9 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Atp6ap1Q9R1Q9 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Atp6ap1Q9R1Q9 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Atp6ap1Q9R1Q9 Efs-202ENSMUST00000227037 2540 ntBASIC14.52□□□□□ -0.08
Atp6ap1Q9R1Q9 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Atp6ap1Q9R1Q9 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Atp6ap1Q9R1Q9 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.52□□□□□ -0.08
Atp6ap1Q9R1Q9 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Atp6ap1Q9R1Q9 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Atp6ap1Q9R1Q9 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Atp6ap1Q9R1Q9 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Atp6ap1Q9R1Q9 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Atp6ap1Q9R1Q9 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Atp6ap1Q9R1Q9 Gm11779-201ENSMUST00000118541 368 ntBASIC14.52□□□□□ -0.09
Atp6ap1Q9R1Q9 Gm16198-201ENSMUST00000118766 670 ntBASIC14.52□□□□□ -0.09
Atp6ap1Q9R1Q9 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.52□□□□□ -0.09
Atp6ap1Q9R1Q9 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.52□□□□□ -0.09
Atp6ap1Q9R1Q9 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.52□□□□□ -0.09
Atp6ap1Q9R1Q9 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Atp6ap1Q9R1Q9 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Atp6ap1Q9R1Q9 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.52□□□□□ -0.09
Atp6ap1Q9R1Q9 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Atp6ap1Q9R1Q9 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Atp6ap1Q9R1Q9 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Atp6ap1Q9R1Q9 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Atp6ap1Q9R1Q9 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Atp6ap1Q9R1Q9 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.52□□□□□ -0.09
Atp6ap1Q9R1Q9 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Atp6ap1Q9R1Q9 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Atp6ap1Q9R1Q9 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.51□□□□□ -0.09
Atp6ap1Q9R1Q9 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Atp6ap1Q9R1Q9 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Atp6ap1Q9R1Q9 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Atp6ap1Q9R1Q9 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Atp6ap1Q9R1Q9 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Atp6ap1Q9R1Q9 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Atp6ap1Q9R1Q9 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Atp6ap1Q9R1Q9 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Atp6ap1Q9R1Q9 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Atp6ap1Q9R1Q9 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Atp6ap1Q9R1Q9 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Atp6ap1Q9R1Q9 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Atp6ap1Q9R1Q9 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Atp6ap1Q9R1Q9 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Atp6ap1Q9R1Q9 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Atp6ap1Q9R1Q9 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Atp6ap1Q9R1Q9 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
Atp6ap1Q9R1Q9 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Atp6ap1Q9R1Q9 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Atp6ap1Q9R1Q9 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.51□□□□□ -0.09
Atp6ap1Q9R1Q9 Mir3113-201ENSMUST00000175478 76 ntBASIC14.51□□□□□ -0.09
Atp6ap1Q9R1Q9 Gm27301-201ENSMUST00000184012 127 ntBASIC14.51□□□□□ -0.09
Atp6ap1Q9R1Q9 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.51□□□□□ -0.09
Atp6ap1Q9R1Q9 Gm27525-201ENSMUST00000184465 107 ntBASIC14.51□□□□□ -0.09
Atp6ap1Q9R1Q9 Gm17968-201ENSMUST00000194902 784 ntBASIC14.51□□□□□ -0.09
Atp6ap1Q9R1Q9 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.51□□□□□ -0.09
Atp6ap1Q9R1Q9 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.51□□□□□ -0.09
Atp6ap1Q9R1Q9 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms