Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nubp2Q9R061 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nubp2Q9R061 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Nubp2Q9R061 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nubp2Q9R061 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nubp2Q9R061 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nubp2Q9R061 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nubp2Q9R061 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nubp2Q9R061 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nubp2Q9R061 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Nubp2Q9R061 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nubp2Q9R061 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nubp2Q9R061 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.2□□□□□ -0.3
Nubp2Q9R061 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nubp2Q9R061 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nubp2Q9R061 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nubp2Q9R061 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nubp2Q9R061 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.2□□□□□ -0.3
Nubp2Q9R061 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Nubp2Q9R061 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nubp2Q9R061 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nubp2Q9R061 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.2□□□□□ -0.3
Nubp2Q9R061 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nubp2Q9R061 Gm11185-201ENSMUST00000117732 1007 ntBASIC13.2□□□□□ -0.3
Nubp2Q9R061 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nubp2Q9R061 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC13.2□□□□□ -0.3
Nubp2Q9R061 Gm37935-201ENSMUST00000192012 982 ntBASIC13.2□□□□□ -0.3
Nubp2Q9R061 Gm43073-201ENSMUST00000198200 1189 ntBASIC13.2□□□□□ -0.3
Nubp2Q9R061 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC13.2□□□□□ -0.3
Nubp2Q9R061 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nubp2Q9R061 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nubp2Q9R061 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC13.2□□□□□ -0.3
Nubp2Q9R061 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nubp2Q9R061 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nubp2Q9R061 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.2□□□□□ -0.3
Nubp2Q9R061 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nubp2Q9R061 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.2□□□□□ -0.3
Nubp2Q9R061 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nubp2Q9R061 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nubp2Q9R061 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nubp2Q9R061 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nubp2Q9R061 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Nubp2Q9R061 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nubp2Q9R061 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nubp2Q9R061 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nubp2Q9R061 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nubp2Q9R061 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nubp2Q9R061 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.19□□□□□ -0.3
Nubp2Q9R061 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nubp2Q9R061 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.19□□□□□ -0.3
Nubp2Q9R061 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nubp2Q9R061 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nubp2Q9R061 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nubp2Q9R061 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nubp2Q9R061 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nubp2Q9R061 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.19□□□□□ -0.3
Nubp2Q9R061 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nubp2Q9R061 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nubp2Q9R061 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nubp2Q9R061 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nubp2Q9R061 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nubp2Q9R061 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nubp2Q9R061 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Nubp2Q9R061 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC13.19□□□□□ -0.3
Nubp2Q9R061 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Nubp2Q9R061 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC13.19□□□□□ -0.3
Nubp2Q9R061 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nubp2Q9R061 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nubp2Q9R061 Gm5867-201ENSMUST00000063197 592 ntBASIC13.19□□□□□ -0.3
Nubp2Q9R061 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nubp2Q9R061 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nubp2Q9R061 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nubp2Q9R061 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nubp2Q9R061 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nubp2Q9R061 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nubp2Q9R061 AC122901.1-201ENSMUST00000214203 1790 ntBASIC13.19□□□□□ -0.3
Nubp2Q9R061 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nubp2Q9R061 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nubp2Q9R061 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nubp2Q9R061 AC131586.3-201ENSMUST00000228355 1367 ntBASIC13.19□□□□□ -0.3
Nubp2Q9R061 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nubp2Q9R061 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nubp2Q9R061 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nubp2Q9R061 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nubp2Q9R061 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nubp2Q9R061 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nubp2Q9R061 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nubp2Q9R061 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nubp2Q9R061 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nubp2Q9R061 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Nubp2Q9R061 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nubp2Q9R061 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nubp2Q9R061 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.18□□□□□ -0.3
Nubp2Q9R061 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nubp2Q9R061 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nubp2Q9R061 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Nubp2Q9R061 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC13.18□□□□□ -0.3
Nubp2Q9R061 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nubp2Q9R061 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC13.18□□□□□ -0.3
Nubp2Q9R061 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms