Protein–RNA interactions for Protein: Q9ES64

Ush1c, Harmonin, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1cQ9ES64 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ush1cQ9ES64 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ush1cQ9ES64 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Ush1cQ9ES64 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.07■□□□□ 0.32
Ush1cQ9ES64 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.07■□□□□ 0.32
Ush1cQ9ES64 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Ush1cQ9ES64 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ush1cQ9ES64 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ush1cQ9ES64 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ush1cQ9ES64 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ush1cQ9ES64 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ush1cQ9ES64 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
Ush1cQ9ES64 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ush1cQ9ES64 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ush1cQ9ES64 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ush1cQ9ES64 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ush1cQ9ES64 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ush1cQ9ES64 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Ush1cQ9ES64 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ush1cQ9ES64 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Ush1cQ9ES64 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ush1cQ9ES64 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ush1cQ9ES64 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.06■□□□□ 0.32
Ush1cQ9ES64 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Ush1cQ9ES64 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ush1cQ9ES64 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ush1cQ9ES64 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ush1cQ9ES64 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ush1cQ9ES64 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ush1cQ9ES64 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ush1cQ9ES64 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Ush1cQ9ES64 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ush1cQ9ES64 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ush1cQ9ES64 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ush1cQ9ES64 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ush1cQ9ES64 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ush1cQ9ES64 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ush1cQ9ES64 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ush1cQ9ES64 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Ush1cQ9ES64 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ush1cQ9ES64 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ush1cQ9ES64 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC17.05■□□□□ 0.32
Ush1cQ9ES64 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ush1cQ9ES64 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ush1cQ9ES64 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ush1cQ9ES64 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ush1cQ9ES64 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ush1cQ9ES64 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ush1cQ9ES64 Gm14859-201ENSMUST00000117752 357 ntBASIC17.05■□□□□ 0.32
Ush1cQ9ES64 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ush1cQ9ES64 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ush1cQ9ES64 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ush1cQ9ES64 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ush1cQ9ES64 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Ush1cQ9ES64 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ush1cQ9ES64 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Ush1cQ9ES64 Gm42471-201ENSMUST00000201457 1865 ntBASIC17.05■□□□□ 0.32
Ush1cQ9ES64 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ush1cQ9ES64 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ush1cQ9ES64 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ush1cQ9ES64 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ush1cQ9ES64 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ush1cQ9ES64 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Ush1cQ9ES64 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ush1cQ9ES64 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Ush1cQ9ES64 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ush1cQ9ES64 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ush1cQ9ES64 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ush1cQ9ES64 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ush1cQ9ES64 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC17.04■□□□□ 0.32
Ush1cQ9ES64 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.04■□□□□ 0.32
Ush1cQ9ES64 Gm12008-201ENSMUST00000117791 755 ntBASIC17.04■□□□□ 0.32
Ush1cQ9ES64 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.04■□□□□ 0.32
Ush1cQ9ES64 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.04■□□□□ 0.32
Ush1cQ9ES64 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ush1cQ9ES64 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ush1cQ9ES64 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ush1cQ9ES64 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.04■□□□□ 0.32
Ush1cQ9ES64 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ush1cQ9ES64 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ush1cQ9ES64 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ush1cQ9ES64 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ush1cQ9ES64 Ankra2-208ENSMUST00000226100 1476 ntBASIC17.04■□□□□ 0.32
Ush1cQ9ES64 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ush1cQ9ES64 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ush1cQ9ES64 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ush1cQ9ES64 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ush1cQ9ES64 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
Ush1cQ9ES64 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ush1cQ9ES64 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Ush1cQ9ES64 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ush1cQ9ES64 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Ush1cQ9ES64 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Ush1cQ9ES64 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ush1cQ9ES64 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ush1cQ9ES64 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ush1cQ9ES64 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ush1cQ9ES64 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ush1cQ9ES64 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ush1cQ9ES64 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms