Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.77□□□□□ -0.05
Tubb3Q9ERD7 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.77□□□□□ -0.05
Tubb3Q9ERD7 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tubb3Q9ERD7 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.77□□□□□ -0.05
Tubb3Q9ERD7 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.77□□□□□ -0.05
Tubb3Q9ERD7 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.77□□□□□ -0.05
Tubb3Q9ERD7 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.05
Tubb3Q9ERD7 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tubb3Q9ERD7 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tubb3Q9ERD7 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tubb3Q9ERD7 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Tubb3Q9ERD7 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tubb3Q9ERD7 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tubb3Q9ERD7 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.77□□□□□ -0.05
Tubb3Q9ERD7 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Tubb3Q9ERD7 Grk6-207ENSMUST00000225925 2769 ntBASIC14.77□□□□□ -0.05
Tubb3Q9ERD7 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tubb3Q9ERD7 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tubb3Q9ERD7 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tubb3Q9ERD7 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tubb3Q9ERD7 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tubb3Q9ERD7 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Tubb3Q9ERD7 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tubb3Q9ERD7 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.76□□□□□ -0.05
Tubb3Q9ERD7 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tubb3Q9ERD7 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tubb3Q9ERD7 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.76□□□□□ -0.05
Tubb3Q9ERD7 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Tubb3Q9ERD7 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tubb3Q9ERD7 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Tubb3Q9ERD7 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tubb3Q9ERD7 Celf4-206ENSMUST00000224553 1729 ntBASIC14.76□□□□□ -0.05
Tubb3Q9ERD7 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.76□□□□□ -0.05
Tubb3Q9ERD7 Gm12008-201ENSMUST00000117791 755 ntBASIC14.76□□□□□ -0.05
Tubb3Q9ERD7 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Tubb3Q9ERD7 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.76□□□□□ -0.05
Tubb3Q9ERD7 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.76□□□□□ -0.05
Tubb3Q9ERD7 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.76□□□□□ -0.05
Tubb3Q9ERD7 Gm45167-201ENSMUST00000208007 322 ntBASIC14.76□□□□□ -0.05
Tubb3Q9ERD7 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tubb3Q9ERD7 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tubb3Q9ERD7 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tubb3Q9ERD7 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tubb3Q9ERD7 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Tubb3Q9ERD7 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.76□□□□□ -0.05
Tubb3Q9ERD7 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tubb3Q9ERD7 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Tubb3Q9ERD7 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tubb3Q9ERD7 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tubb3Q9ERD7 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tubb3Q9ERD7 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tubb3Q9ERD7 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Tubb3Q9ERD7 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tubb3Q9ERD7 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tubb3Q9ERD7 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tubb3Q9ERD7 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.75□□□□□ -0.05
Tubb3Q9ERD7 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tubb3Q9ERD7 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tubb3Q9ERD7 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tubb3Q9ERD7 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tubb3Q9ERD7 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tubb3Q9ERD7 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.75□□□□□ -0.05
Tubb3Q9ERD7 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Tubb3Q9ERD7 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.75□□□□□ -0.05
Tubb3Q9ERD7 Gm7787-201ENSMUST00000216858 688 ntBASIC14.75□□□□□ -0.05
Tubb3Q9ERD7 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.75□□□□□ -0.05
Tubb3Q9ERD7 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tubb3Q9ERD7 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tubb3Q9ERD7 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tubb3Q9ERD7 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Tubb3Q9ERD7 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tubb3Q9ERD7 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.75□□□□□ -0.05
Tubb3Q9ERD7 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tubb3Q9ERD7 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Tubb3Q9ERD7 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Tubb3Q9ERD7 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tubb3Q9ERD7 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Tubb3Q9ERD7 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tubb3Q9ERD7 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tubb3Q9ERD7 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tubb3Q9ERD7 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tubb3Q9ERD7 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.74□□□□□ -0.05
Tubb3Q9ERD7 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.74□□□□□ -0.05
Tubb3Q9ERD7 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tubb3Q9ERD7 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.74□□□□□ -0.05
Tubb3Q9ERD7 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Tubb3Q9ERD7 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.74□□□□□ -0.05
Tubb3Q9ERD7 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.74□□□□□ -0.05
Tubb3Q9ERD7 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tubb3Q9ERD7 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tubb3Q9ERD7 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.74□□□□□ -0.05
Tubb3Q9ERD7 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Tubb3Q9ERD7 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Tubb3Q9ERD7 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tubb3Q9ERD7 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Tubb3Q9ERD7 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tubb3Q9ERD7 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Tubb3Q9ERD7 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tubb3Q9ERD7 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tubb3Q9ERD7 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms