Protein–RNA interactions for Protein: Q9ER88

Dap3, 28S ribosomal protein S29, mitochondrial, mousemouse

Known RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dap3Q9ER88 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Dap3Q9ER88 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Dap3Q9ER88 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Dap3Q9ER88 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Dap3Q9ER88 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.67□□□□□ -0.22
Dap3Q9ER88 Gm4609-201ENSMUST00000106443 1002 ntBASIC13.67□□□□□ -0.22
Dap3Q9ER88 Gm5138-201ENSMUST00000113842 1002 ntBASIC13.67□□□□□ -0.22
Dap3Q9ER88 Gm15191-201ENSMUST00000117933 1000 ntBASIC13.67□□□□□ -0.22
Dap3Q9ER88 Gm12182-201ENSMUST00000118655 1008 ntBASIC13.67□□□□□ -0.22
Dap3Q9ER88 Gm13882-201ENSMUST00000120886 1002 ntBASIC13.67□□□□□ -0.22
Dap3Q9ER88 Gm10284-201ENSMUST00000145057 1005 ntBASIC13.67□□□□□ -0.22
Dap3Q9ER88 Gm10481-201ENSMUST00000179228 1002 ntBASIC13.67□□□□□ -0.22
Dap3Q9ER88 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC13.67□□□□□ -0.22
Dap3Q9ER88 Gm2574-201ENSMUST00000181051 1002 ntBASIC13.67□□□□□ -0.22
Dap3Q9ER88 Gm3200-201ENSMUST00000181493 1002 ntBASIC13.67□□□□□ -0.22
Dap3Q9ER88 Gm8825-201ENSMUST00000182565 998 ntBASIC13.67□□□□□ -0.22
Dap3Q9ER88 Gm4518-201ENSMUST00000182638 718 ntBASIC13.67□□□□□ -0.22
Dap3Q9ER88 Gm8330-201ENSMUST00000182754 1008 ntBASIC13.67□□□□□ -0.22
Dap3Q9ER88 Gm4575-201ENSMUST00000182991 1002 ntBASIC13.67□□□□□ -0.22
Dap3Q9ER88 Gm8709-201ENSMUST00000183230 1012 ntBASIC13.67□□□□□ -0.22
Dap3Q9ER88 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Dap3Q9ER88 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC13.67□□□□□ -0.22
Dap3Q9ER88 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Dap3Q9ER88 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Dap3Q9ER88 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Dap3Q9ER88 Gm10293-201ENSMUST00000076317 1002 ntBASIC13.67□□□□□ -0.22
Dap3Q9ER88 Gm6316-201ENSMUST00000082064 1020 ntBASIC13.67□□□□□ -0.22
Dap3Q9ER88 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Dap3Q9ER88 Matn2-206ENSMUST00000228570 2798 ntBASIC13.67□□□□□ -0.22
Dap3Q9ER88 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Dap3Q9ER88 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Dap3Q9ER88 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Dap3Q9ER88 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.67□□□□□ -0.22
Dap3Q9ER88 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Dap3Q9ER88 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.22
Dap3Q9ER88 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.67□□□□□ -0.22
Dap3Q9ER88 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.67□□□□□ -0.22
Dap3Q9ER88 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Dap3Q9ER88 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Dap3Q9ER88 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Dap3Q9ER88 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Dap3Q9ER88 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Dap3Q9ER88 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Dap3Q9ER88 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Dap3Q9ER88 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Dap3Q9ER88 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.66□□□□□ -0.22
Dap3Q9ER88 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Dap3Q9ER88 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Dap3Q9ER88 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Dap3Q9ER88 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Dap3Q9ER88 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Dap3Q9ER88 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Dap3Q9ER88 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Dap3Q9ER88 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Dap3Q9ER88 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Dap3Q9ER88 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC13.66□□□□□ -0.22
Dap3Q9ER88 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC13.66□□□□□ -0.22
Dap3Q9ER88 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Dap3Q9ER88 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Dap3Q9ER88 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Dap3Q9ER88 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Dap3Q9ER88 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Dap3Q9ER88 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
Dap3Q9ER88 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Dap3Q9ER88 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Dap3Q9ER88 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Dap3Q9ER88 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Dap3Q9ER88 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.65□□□□□ -0.22
Dap3Q9ER88 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Dap3Q9ER88 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Dap3Q9ER88 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Dap3Q9ER88 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Dap3Q9ER88 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Dap3Q9ER88 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Dap3Q9ER88 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Dap3Q9ER88 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Dap3Q9ER88 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.65□□□□□ -0.22
Dap3Q9ER88 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Dap3Q9ER88 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Dap3Q9ER88 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Dap3Q9ER88 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Dap3Q9ER88 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Dap3Q9ER88 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Dap3Q9ER88 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Dap3Q9ER88 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC13.65□□□□□ -0.22
Dap3Q9ER88 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Dap3Q9ER88 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Dap3Q9ER88 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Dap3Q9ER88 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Dap3Q9ER88 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Dap3Q9ER88 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Dap3Q9ER88 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Dap3Q9ER88 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Dap3Q9ER88 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.65□□□□□ -0.22
Dap3Q9ER88 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Dap3Q9ER88 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Dap3Q9ER88 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Dap3Q9ER88 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Dap3Q9ER88 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Dap3Q9ER88 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms