Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp5Q9D7S9 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC18.6■□□□□ 0.57
Chmp5Q9D7S9 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp5Q9D7S9 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp5Q9D7S9 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp5Q9D7S9 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp5Q9D7S9 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp5Q9D7S9 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Chmp5Q9D7S9 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC18.6■□□□□ 0.57
Chmp5Q9D7S9 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp5Q9D7S9 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp5Q9D7S9 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Chmp5Q9D7S9 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC18.6■□□□□ 0.57
Chmp5Q9D7S9 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp5Q9D7S9 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Chmp5Q9D7S9 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp5Q9D7S9 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp5Q9D7S9 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp5Q9D7S9 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp5Q9D7S9 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp5Q9D7S9 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Chmp5Q9D7S9 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp5Q9D7S9 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp5Q9D7S9 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp5Q9D7S9 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC18.6■□□□□ 0.57
Chmp5Q9D7S9 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp5Q9D7S9 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC18.59■□□□□ 0.57
Chmp5Q9D7S9 AC159649.2-201ENSMUST00000222984 3223 ntBASIC18.59■□□□□ 0.57
Chmp5Q9D7S9 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Chmp5Q9D7S9 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC18.59■□□□□ 0.57
Chmp5Q9D7S9 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Chmp5Q9D7S9 Gm7284-201ENSMUST00000131667 944 ntBASIC18.59■□□□□ 0.57
Chmp5Q9D7S9 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chmp5Q9D7S9 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chmp5Q9D7S9 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chmp5Q9D7S9 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chmp5Q9D7S9 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chmp5Q9D7S9 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chmp5Q9D7S9 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chmp5Q9D7S9 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Chmp5Q9D7S9 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chmp5Q9D7S9 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chmp5Q9D7S9 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chmp5Q9D7S9 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC18.58■□□□□ 0.57
Chmp5Q9D7S9 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Chmp5Q9D7S9 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Chmp5Q9D7S9 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Chmp5Q9D7S9 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Chmp5Q9D7S9 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC18.58■□□□□ 0.57
Chmp5Q9D7S9 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Chmp5Q9D7S9 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Chmp5Q9D7S9 Gm12644-201ENSMUST00000119935 606 ntBASIC18.58■□□□□ 0.56
Chmp5Q9D7S9 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Chmp5Q9D7S9 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC18.58■□□□□ 0.56
Chmp5Q9D7S9 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Chmp5Q9D7S9 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Chmp5Q9D7S9 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC18.58■□□□□ 0.56
Chmp5Q9D7S9 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Chmp5Q9D7S9 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Chmp5Q9D7S9 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Chmp5Q9D7S9 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Chmp5Q9D7S9 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Chmp5Q9D7S9 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
Chmp5Q9D7S9 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Chmp5Q9D7S9 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Chmp5Q9D7S9 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Chmp5Q9D7S9 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Chmp5Q9D7S9 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Chmp5Q9D7S9 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Chmp5Q9D7S9 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Chmp5Q9D7S9 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chmp5Q9D7S9 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chmp5Q9D7S9 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chmp5Q9D7S9 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chmp5Q9D7S9 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chmp5Q9D7S9 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chmp5Q9D7S9 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chmp5Q9D7S9 Gm11780-201ENSMUST00000136880 516 ntBASIC18.57■□□□□ 0.56
Chmp5Q9D7S9 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
Chmp5Q9D7S9 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Chmp5Q9D7S9 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chmp5Q9D7S9 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chmp5Q9D7S9 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chmp5Q9D7S9 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Chmp5Q9D7S9 Gm43399-201ENSMUST00000202546 2374 ntBASIC18.57■□□□□ 0.56
Chmp5Q9D7S9 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chmp5Q9D7S9 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chmp5Q9D7S9 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC18.57■□□□□ 0.56
Chmp5Q9D7S9 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chmp5Q9D7S9 Gm5184-201ENSMUST00000220417 1702 ntBASIC18.57■□□□□ 0.56
Chmp5Q9D7S9 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chmp5Q9D7S9 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chmp5Q9D7S9 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC18.56■□□□□ 0.56
Chmp5Q9D7S9 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chmp5Q9D7S9 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
Chmp5Q9D7S9 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chmp5Q9D7S9 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chmp5Q9D7S9 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC18.56■□□□□ 0.56
Chmp5Q9D7S9 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chmp5Q9D7S9 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms