Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cfap53Q9D439 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cfap53Q9D439 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
Cfap53Q9D439 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cfap53Q9D439 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cfap53Q9D439 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cfap53Q9D439 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Cfap53Q9D439 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cfap53Q9D439 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cfap53Q9D439 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cfap53Q9D439 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cfap53Q9D439 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cfap53Q9D439 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Cfap53Q9D439 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cfap53Q9D439 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cfap53Q9D439 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.3■□□□□ 0.2
Cfap53Q9D439 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC16.3■□□□□ 0.2
Cfap53Q9D439 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC16.3■□□□□ 0.2
Cfap53Q9D439 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cfap53Q9D439 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cfap53Q9D439 Gm10313-201ENSMUST00000095320 1002 ntBASIC16.3■□□□□ 0.2
Cfap53Q9D439 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cfap53Q9D439 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cfap53Q9D439 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cfap53Q9D439 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Cfap53Q9D439 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Cfap53Q9D439 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cfap53Q9D439 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
Cfap53Q9D439 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cfap53Q9D439 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cfap53Q9D439 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cfap53Q9D439 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cfap53Q9D439 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cfap53Q9D439 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC16.29■□□□□ 0.2
Cfap53Q9D439 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Cfap53Q9D439 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cfap53Q9D439 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cfap53Q9D439 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cfap53Q9D439 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cfap53Q9D439 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Cfap53Q9D439 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cfap53Q9D439 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cfap53Q9D439 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC16.29■□□□□ 0.2
Cfap53Q9D439 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cfap53Q9D439 Gm12008-201ENSMUST00000117791 755 ntBASIC16.29■□□□□ 0.2
Cfap53Q9D439 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC16.29■□□□□ 0.2
Cfap53Q9D439 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC16.29■□□□□ 0.2
Cfap53Q9D439 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cfap53Q9D439 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Cfap53Q9D439 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cfap53Q9D439 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cfap53Q9D439 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cfap53Q9D439 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Cfap53Q9D439 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cfap53Q9D439 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cfap53Q9D439 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cfap53Q9D439 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cfap53Q9D439 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cfap53Q9D439 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Cfap53Q9D439 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cfap53Q9D439 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cfap53Q9D439 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cfap53Q9D439 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cfap53Q9D439 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cfap53Q9D439 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cfap53Q9D439 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Cfap53Q9D439 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Cfap53Q9D439 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cfap53Q9D439 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC16.28■□□□□ 0.2
Cfap53Q9D439 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
Cfap53Q9D439 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cfap53Q9D439 Gm14140-201ENSMUST00000119999 995 ntBASIC16.28■□□□□ 0.2
Cfap53Q9D439 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cfap53Q9D439 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Cfap53Q9D439 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.28■□□□□ 0.2
Cfap53Q9D439 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cfap53Q9D439 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cfap53Q9D439 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cfap53Q9D439 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cfap53Q9D439 Gm14780-201ENSMUST00000118387 2737 ntBASIC16.28■□□□□ 0.2
Cfap53Q9D439 AC025913.2-201ENSMUST00000220136 1766 ntBASIC16.28■□□□□ 0.2
Cfap53Q9D439 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC16.28■□□□□ 0.2
Cfap53Q9D439 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Cfap53Q9D439 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Cfap53Q9D439 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cfap53Q9D439 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
Cfap53Q9D439 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC16.27■□□□□ 0.2
Cfap53Q9D439 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cfap53Q9D439 Gm5357-201ENSMUST00000212720 1924 ntBASIC16.27■□□□□ 0.2
Cfap53Q9D439 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Cfap53Q9D439 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cfap53Q9D439 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cfap53Q9D439 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cfap53Q9D439 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cfap53Q9D439 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cfap53Q9D439 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cfap53Q9D439 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16.27■□□□□ 0.2
Cfap53Q9D439 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC16.27■□□□□ 0.2
Cfap53Q9D439 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC16.27■□□□□ 0.2
Cfap53Q9D439 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms