Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC17.67■□□□□ 0.42
Stag1Q9D3E6 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Stag1Q9D3E6 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Stag1Q9D3E6 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Stag1Q9D3E6 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Stag1Q9D3E6 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Stag1Q9D3E6 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Stag1Q9D3E6 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Stag1Q9D3E6 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC17.66■□□□□ 0.42
Stag1Q9D3E6 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Stag1Q9D3E6 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Stag1Q9D3E6 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Stag1Q9D3E6 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Stag1Q9D3E6 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Stag1Q9D3E6 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Stag1Q9D3E6 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Stag1Q9D3E6 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Stag1Q9D3E6 Gm5479-201ENSMUST00000160578 435 ntBASIC17.66■□□□□ 0.42
Stag1Q9D3E6 Mir8102-201ENSMUST00000184148 139 ntBASIC17.66■□□□□ 0.42
Stag1Q9D3E6 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Stag1Q9D3E6 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Stag1Q9D3E6 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC17.66■□□□□ 0.42
Stag1Q9D3E6 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Stag1Q9D3E6 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Stag1Q9D3E6 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Stag1Q9D3E6 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Stag1Q9D3E6 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Stag1Q9D3E6 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Stag1Q9D3E6 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Stag1Q9D3E6 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Stag1Q9D3E6 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Stag1Q9D3E6 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Stag1Q9D3E6 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Stag1Q9D3E6 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Stag1Q9D3E6 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Stag1Q9D3E6 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC17.65■□□□□ 0.42
Stag1Q9D3E6 Gm27437-201ENSMUST00000183429 107 ntBASIC17.65■□□□□ 0.42
Stag1Q9D3E6 Gm30437-201ENSMUST00000206086 1201 ntBASIC17.65■□□□□ 0.42
Stag1Q9D3E6 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Stag1Q9D3E6 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Stag1Q9D3E6 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Stag1Q9D3E6 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Stag1Q9D3E6 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Stag1Q9D3E6 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Stag1Q9D3E6 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Stag1Q9D3E6 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Stag1Q9D3E6 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC17.65■□□□□ 0.42
Stag1Q9D3E6 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Stag1Q9D3E6 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Stag1Q9D3E6 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Stag1Q9D3E6 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Stag1Q9D3E6 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Stag1Q9D3E6 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
Stag1Q9D3E6 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Stag1Q9D3E6 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Stag1Q9D3E6 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Stag1Q9D3E6 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Stag1Q9D3E6 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC17.64■□□□□ 0.41
Stag1Q9D3E6 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Stag1Q9D3E6 Wdyhv1-203ENSMUST00000226889 394 ntBASIC17.64■□□□□ 0.41
Stag1Q9D3E6 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Stag1Q9D3E6 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Stag1Q9D3E6 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Stag1Q9D3E6 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Stag1Q9D3E6 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Stag1Q9D3E6 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Stag1Q9D3E6 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Stag1Q9D3E6 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Stag1Q9D3E6 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Stag1Q9D3E6 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Stag1Q9D3E6 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Stag1Q9D3E6 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Stag1Q9D3E6 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Stag1Q9D3E6 Gm6756-201ENSMUST00000180647 1620 ntBASIC17.63■□□□□ 0.41
Stag1Q9D3E6 Gm13823-201ENSMUST00000119930 345 ntBASIC17.63■□□□□ 0.41
Stag1Q9D3E6 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Stag1Q9D3E6 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Stag1Q9D3E6 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Stag1Q9D3E6 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Stag1Q9D3E6 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Stag1Q9D3E6 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Stag1Q9D3E6 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Stag1Q9D3E6 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC17.63■□□□□ 0.41
Stag1Q9D3E6 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.63■□□□□ 0.41
Stag1Q9D3E6 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Stag1Q9D3E6 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Stag1Q9D3E6 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Stag1Q9D3E6 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Stag1Q9D3E6 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Stag1Q9D3E6 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Stag1Q9D3E6 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Stag1Q9D3E6 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Stag1Q9D3E6 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Stag1Q9D3E6 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Stag1Q9D3E6 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Stag1Q9D3E6 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Stag1Q9D3E6 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Stag1Q9D3E6 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Stag1Q9D3E6 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Stag1Q9D3E6 Tcf21-202ENSMUST00000218002 1788 ntBASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms