Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Upk1aQ9D132 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Upk1aQ9D132 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Upk1aQ9D132 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Upk1aQ9D132 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.09□□□□□ -0.15
Upk1aQ9D132 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Upk1aQ9D132 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Upk1aQ9D132 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Upk1aQ9D132 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.09□□□□□ -0.15
Upk1aQ9D132 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Upk1aQ9D132 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Upk1aQ9D132 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.08□□□□□ -0.15
Upk1aQ9D132 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Upk1aQ9D132 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Upk1aQ9D132 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.08□□□□□ -0.16
Upk1aQ9D132 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.08□□□□□ -0.16
Upk1aQ9D132 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Upk1aQ9D132 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Upk1aQ9D132 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC14.08□□□□□ -0.16
Upk1aQ9D132 Gm12895-201ENSMUST00000122214 226 ntBASIC14.08□□□□□ -0.16
Upk1aQ9D132 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.08□□□□□ -0.16
Upk1aQ9D132 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
Upk1aQ9D132 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.08□□□□□ -0.16
Upk1aQ9D132 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC14.08□□□□□ -0.16
Upk1aQ9D132 Gm8655-201ENSMUST00000221159 852 ntBASIC14.08□□□□□ -0.16
Upk1aQ9D132 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.08□□□□□ -0.16
Upk1aQ9D132 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Upk1aQ9D132 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Upk1aQ9D132 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Upk1aQ9D132 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Upk1aQ9D132 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Upk1aQ9D132 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Upk1aQ9D132 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.08□□□□□ -0.16
Upk1aQ9D132 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Upk1aQ9D132 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Upk1aQ9D132 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Upk1aQ9D132 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Upk1aQ9D132 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Upk1aQ9D132 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Upk1aQ9D132 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Upk1aQ9D132 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Upk1aQ9D132 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Upk1aQ9D132 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Upk1aQ9D132 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Upk1aQ9D132 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Upk1aQ9D132 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Upk1aQ9D132 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Upk1aQ9D132 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Upk1aQ9D132 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Upk1aQ9D132 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.07□□□□□ -0.16
Upk1aQ9D132 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.07□□□□□ -0.16
Upk1aQ9D132 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Upk1aQ9D132 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Upk1aQ9D132 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Upk1aQ9D132 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Upk1aQ9D132 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Upk1aQ9D132 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Upk1aQ9D132 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Upk1aQ9D132 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Upk1aQ9D132 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Upk1aQ9D132 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Upk1aQ9D132 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.07□□□□□ -0.16
Upk1aQ9D132 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Upk1aQ9D132 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Upk1aQ9D132 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upk1aQ9D132 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upk1aQ9D132 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Upk1aQ9D132 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.06□□□□□ -0.16
Upk1aQ9D132 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Upk1aQ9D132 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upk1aQ9D132 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upk1aQ9D132 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upk1aQ9D132 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.06□□□□□ -0.16
Upk1aQ9D132 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Upk1aQ9D132 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Upk1aQ9D132 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.06□□□□□ -0.16
Upk1aQ9D132 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upk1aQ9D132 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Upk1aQ9D132 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Upk1aQ9D132 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.06□□□□□ -0.16
Upk1aQ9D132 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.06□□□□□ -0.16
Upk1aQ9D132 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upk1aQ9D132 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upk1aQ9D132 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upk1aQ9D132 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upk1aQ9D132 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upk1aQ9D132 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upk1aQ9D132 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Upk1aQ9D132 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upk1aQ9D132 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upk1aQ9D132 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upk1aQ9D132 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.06□□□□□ -0.16
Upk1aQ9D132 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upk1aQ9D132 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upk1aQ9D132 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Upk1aQ9D132 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upk1aQ9D132 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upk1aQ9D132 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upk1aQ9D132 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Upk1aQ9D132 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms