Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trim13Q9CYB0 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim13Q9CYB0 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim13Q9CYB0 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Trim13Q9CYB0 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trim13Q9CYB0 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim13Q9CYB0 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim13Q9CYB0 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim13Q9CYB0 Grk6-207ENSMUST00000225925 2769 ntBASIC13.76□□□□□ -0.21
Trim13Q9CYB0 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim13Q9CYB0 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Trim13Q9CYB0 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.76□□□□□ -0.21
Trim13Q9CYB0 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim13Q9CYB0 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim13Q9CYB0 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim13Q9CYB0 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim13Q9CYB0 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC13.75□□□□□ -0.21
Trim13Q9CYB0 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim13Q9CYB0 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim13Q9CYB0 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC13.75□□□□□ -0.21
Trim13Q9CYB0 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim13Q9CYB0 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim13Q9CYB0 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim13Q9CYB0 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim13Q9CYB0 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim13Q9CYB0 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim13Q9CYB0 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim13Q9CYB0 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Trim13Q9CYB0 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trim13Q9CYB0 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim13Q9CYB0 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC13.75□□□□□ -0.21
Trim13Q9CYB0 Gm44454-201ENSMUST00000198541 138 ntBASIC13.75□□□□□ -0.21
Trim13Q9CYB0 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC13.75□□□□□ -0.21
Trim13Q9CYB0 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim13Q9CYB0 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim13Q9CYB0 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim13Q9CYB0 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim13Q9CYB0 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim13Q9CYB0 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.75□□□□□ -0.21
Trim13Q9CYB0 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim13Q9CYB0 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim13Q9CYB0 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim13Q9CYB0 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.75□□□□□ -0.21
Trim13Q9CYB0 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim13Q9CYB0 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim13Q9CYB0 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim13Q9CYB0 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim13Q9CYB0 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trim13Q9CYB0 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim13Q9CYB0 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Trim13Q9CYB0 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim13Q9CYB0 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Trim13Q9CYB0 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.75□□□□□ -0.21
Trim13Q9CYB0 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim13Q9CYB0 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim13Q9CYB0 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim13Q9CYB0 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim13Q9CYB0 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim13Q9CYB0 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim13Q9CYB0 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim13Q9CYB0 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim13Q9CYB0 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim13Q9CYB0 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.74□□□□□ -0.21
Trim13Q9CYB0 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim13Q9CYB0 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim13Q9CYB0 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim13Q9CYB0 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim13Q9CYB0 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim13Q9CYB0 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim13Q9CYB0 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim13Q9CYB0 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim13Q9CYB0 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim13Q9CYB0 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim13Q9CYB0 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim13Q9CYB0 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim13Q9CYB0 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Trim13Q9CYB0 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim13Q9CYB0 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim13Q9CYB0 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC13.74□□□□□ -0.21
Trim13Q9CYB0 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim13Q9CYB0 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trim13Q9CYB0 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim13Q9CYB0 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC13.74□□□□□ -0.21
Trim13Q9CYB0 Gm17808-201ENSMUST00000200859 894 ntBASIC13.74□□□□□ -0.21
Trim13Q9CYB0 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim13Q9CYB0 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim13Q9CYB0 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim13Q9CYB0 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim13Q9CYB0 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim13Q9CYB0 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim13Q9CYB0 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim13Q9CYB0 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Trim13Q9CYB0 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim13Q9CYB0 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.74□□□□□ -0.21
Trim13Q9CYB0 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim13Q9CYB0 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Trim13Q9CYB0 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trim13Q9CYB0 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Trim13Q9CYB0 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim13Q9CYB0 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms