Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ssr1Q9CY50 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ssr1Q9CY50 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ssr1Q9CY50 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ssr1Q9CY50 Gm43399-201ENSMUST00000202546 2374 ntBASIC16.15■□□□□ 0.18
Ssr1Q9CY50 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Ssr1Q9CY50 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ssr1Q9CY50 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ssr1Q9CY50 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ssr1Q9CY50 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ssr1Q9CY50 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ssr1Q9CY50 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ssr1Q9CY50 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Ssr1Q9CY50 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Ssr1Q9CY50 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Ssr1Q9CY50 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ssr1Q9CY50 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ssr1Q9CY50 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ssr1Q9CY50 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ssr1Q9CY50 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ssr1Q9CY50 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ssr1Q9CY50 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ssr1Q9CY50 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ssr1Q9CY50 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ssr1Q9CY50 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ssr1Q9CY50 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ssr1Q9CY50 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Ssr1Q9CY50 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ssr1Q9CY50 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.14■□□□□ 0.17
Ssr1Q9CY50 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.14■□□□□ 0.17
Ssr1Q9CY50 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ssr1Q9CY50 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ssr1Q9CY50 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ssr1Q9CY50 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ssr1Q9CY50 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ssr1Q9CY50 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ssr1Q9CY50 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ssr1Q9CY50 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC16.14■□□□□ 0.17
Ssr1Q9CY50 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ssr1Q9CY50 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ssr1Q9CY50 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ssr1Q9CY50 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ssr1Q9CY50 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ssr1Q9CY50 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ssr1Q9CY50 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ssr1Q9CY50 Gm8242-201ENSMUST00000193029 1420 ntBASIC16.13■□□□□ 0.17
Ssr1Q9CY50 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ssr1Q9CY50 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ssr1Q9CY50 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ssr1Q9CY50 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ssr1Q9CY50 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ssr1Q9CY50 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Ssr1Q9CY50 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ssr1Q9CY50 Gm21362-201ENSMUST00000194272 928 ntBASIC16.13■□□□□ 0.17
Ssr1Q9CY50 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.13■□□□□ 0.17
Ssr1Q9CY50 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ssr1Q9CY50 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.13■□□□□ 0.17
Ssr1Q9CY50 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.13■□□□□ 0.17
Ssr1Q9CY50 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ssr1Q9CY50 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ssr1Q9CY50 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ssr1Q9CY50 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Ssr1Q9CY50 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Ssr1Q9CY50 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ssr1Q9CY50 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Ssr1Q9CY50 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ssr1Q9CY50 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ssr1Q9CY50 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ssr1Q9CY50 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ssr1Q9CY50 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ssr1Q9CY50 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC16.13■□□□□ 0.17
Ssr1Q9CY50 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ssr1Q9CY50 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ssr1Q9CY50 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ssr1Q9CY50 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Ssr1Q9CY50 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ssr1Q9CY50 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ssr1Q9CY50 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ssr1Q9CY50 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ssr1Q9CY50 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ssr1Q9CY50 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Ssr1Q9CY50 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC16.12■□□□□ 0.17
Ssr1Q9CY50 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ssr1Q9CY50 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ssr1Q9CY50 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Ssr1Q9CY50 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ssr1Q9CY50 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.12■□□□□ 0.17
Ssr1Q9CY50 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ssr1Q9CY50 Gm8318-201ENSMUST00000182954 872 ntBASIC16.12■□□□□ 0.17
Ssr1Q9CY50 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.12■□□□□ 0.17
Ssr1Q9CY50 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.12■□□□□ 0.17
Ssr1Q9CY50 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ssr1Q9CY50 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Ssr1Q9CY50 Spr-ps1-201ENSMUST00000089584 605 ntBASIC16.12■□□□□ 0.17
Ssr1Q9CY50 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ssr1Q9CY50 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ssr1Q9CY50 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ssr1Q9CY50 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Ssr1Q9CY50 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ssr1Q9CY50 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms