Protein–RNA interactions for Protein: Q9CWX4

Rpusd4, Mitochondrial RNA pseudouridine synthase Rpusd4, mousemouse

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpusd4Q9CWX4 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpusd4Q9CWX4 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpusd4Q9CWX4 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC12.62□□□□□ -0.39
Rpusd4Q9CWX4 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpusd4Q9CWX4 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Rpusd4Q9CWX4 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Rpusd4Q9CWX4 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Rpusd4Q9CWX4 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpusd4Q9CWX4 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rpusd4Q9CWX4 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpusd4Q9CWX4 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpusd4Q9CWX4 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Rpusd4Q9CWX4 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpusd4Q9CWX4 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC12.61□□□□□ -0.39
Rpusd4Q9CWX4 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpusd4Q9CWX4 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC12.61□□□□□ -0.39
Rpusd4Q9CWX4 Gm37019-201ENSMUST00000192133 2134 ntBASIC12.61□□□□□ -0.39
Rpusd4Q9CWX4 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpusd4Q9CWX4 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rpusd4Q9CWX4 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpusd4Q9CWX4 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpusd4Q9CWX4 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Rpusd4Q9CWX4 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpusd4Q9CWX4 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rpusd4Q9CWX4 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rpusd4Q9CWX4 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC12.61□□□□□ -0.39
Rpusd4Q9CWX4 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Rpusd4Q9CWX4 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
Rpusd4Q9CWX4 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rpusd4Q9CWX4 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpusd4Q9CWX4 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpusd4Q9CWX4 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpusd4Q9CWX4 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpusd4Q9CWX4 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Rpusd4Q9CWX4 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC12.61□□□□□ -0.39
Rpusd4Q9CWX4 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.61□□□□□ -0.39
Rpusd4Q9CWX4 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpusd4Q9CWX4 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpusd4Q9CWX4 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpusd4Q9CWX4 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Rpusd4Q9CWX4 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.61□□□□□ -0.39
Rpusd4Q9CWX4 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rpusd4Q9CWX4 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpusd4Q9CWX4 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpusd4Q9CWX4 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpusd4Q9CWX4 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Rpusd4Q9CWX4 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpusd4Q9CWX4 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpusd4Q9CWX4 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rpusd4Q9CWX4 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpusd4Q9CWX4 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpusd4Q9CWX4 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpusd4Q9CWX4 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpusd4Q9CWX4 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpusd4Q9CWX4 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpusd4Q9CWX4 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpusd4Q9CWX4 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.6□□□□□ -0.39
Rpusd4Q9CWX4 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Rpusd4Q9CWX4 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpusd4Q9CWX4 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Rpusd4Q9CWX4 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpusd4Q9CWX4 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpusd4Q9CWX4 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpusd4Q9CWX4 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpusd4Q9CWX4 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpusd4Q9CWX4 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Rpusd4Q9CWX4 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpusd4Q9CWX4 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Rpusd4Q9CWX4 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Rpusd4Q9CWX4 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Rpusd4Q9CWX4 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC12.6□□□□□ -0.39
Rpusd4Q9CWX4 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC12.6□□□□□ -0.39
Rpusd4Q9CWX4 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC12.6□□□□□ -0.39
Rpusd4Q9CWX4 AC133598.3-202ENSMUST00000224219 531 ntBASIC12.6□□□□□ -0.39
Rpusd4Q9CWX4 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpusd4Q9CWX4 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpusd4Q9CWX4 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC12.6□□□□□ -0.39
Rpusd4Q9CWX4 Gm38327-201ENSMUST00000195852 1755 ntBASIC12.6□□□□□ -0.39
Rpusd4Q9CWX4 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpusd4Q9CWX4 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpusd4Q9CWX4 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rpusd4Q9CWX4 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpusd4Q9CWX4 Gm3928-201ENSMUST00000121141 1307 ntBASIC12.6□□□□□ -0.39
Rpusd4Q9CWX4 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpusd4Q9CWX4 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.59□□□□□ -0.39
Rpusd4Q9CWX4 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpusd4Q9CWX4 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpusd4Q9CWX4 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpusd4Q9CWX4 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpusd4Q9CWX4 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpusd4Q9CWX4 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpusd4Q9CWX4 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpusd4Q9CWX4 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpusd4Q9CWX4 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpusd4Q9CWX4 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Rpusd4Q9CWX4 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpusd4Q9CWX4 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Rpusd4Q9CWX4 Gm18733-201ENSMUST00000173950 856 ntBASIC12.59□□□□□ -0.39
Rpusd4Q9CWX4 Gm19164-201ENSMUST00000210667 640 ntBASIC12.59□□□□□ -0.39
Rpusd4Q9CWX4 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms