Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lsm7Q9CQQ8 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lsm7Q9CQQ8 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lsm7Q9CQQ8 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Lsm7Q9CQQ8 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lsm7Q9CQQ8 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.99□□□□□ -0.01
Lsm7Q9CQQ8 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lsm7Q9CQQ8 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.99□□□□□ -0.01
Lsm7Q9CQQ8 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lsm7Q9CQQ8 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lsm7Q9CQQ8 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lsm7Q9CQQ8 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lsm7Q9CQQ8 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lsm7Q9CQQ8 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lsm7Q9CQQ8 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lsm7Q9CQQ8 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.99□□□□□ -0.01
Lsm7Q9CQQ8 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm7Q9CQQ8 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
Lsm7Q9CQQ8 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm7Q9CQQ8 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm7Q9CQQ8 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.98□□□□□ -0.01
Lsm7Q9CQQ8 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.98□□□□□ -0.01
Lsm7Q9CQQ8 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm7Q9CQQ8 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Lsm7Q9CQQ8 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm7Q9CQQ8 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.98□□□□□ -0.01
Lsm7Q9CQQ8 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm7Q9CQQ8 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm7Q9CQQ8 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm7Q9CQQ8 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm7Q9CQQ8 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
Lsm7Q9CQQ8 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.98□□□□□ -0.01
Lsm7Q9CQQ8 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.98□□□□□ -0.01
Lsm7Q9CQQ8 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.98□□□□□ -0.01
Lsm7Q9CQQ8 Gm9824-201ENSMUST00000178707 561 ntBASIC14.98□□□□□ -0.01
Lsm7Q9CQQ8 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.98□□□□□ -0.01
Lsm7Q9CQQ8 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.98□□□□□ -0.01
Lsm7Q9CQQ8 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.98□□□□□ -0.01
Lsm7Q9CQQ8 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.98□□□□□ -0.01
Lsm7Q9CQQ8 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm7Q9CQQ8 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm7Q9CQQ8 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm7Q9CQQ8 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm7Q9CQQ8 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm7Q9CQQ8 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm7Q9CQQ8 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm7Q9CQQ8 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm7Q9CQQ8 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Lsm7Q9CQQ8 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm7Q9CQQ8 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm7Q9CQQ8 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm7Q9CQQ8 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm7Q9CQQ8 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Lsm7Q9CQQ8 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm7Q9CQQ8 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm7Q9CQQ8 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm7Q9CQQ8 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm7Q9CQQ8 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm7Q9CQQ8 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm7Q9CQQ8 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm7Q9CQQ8 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.97□□□□□ -0.01
Lsm7Q9CQQ8 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Lsm7Q9CQQ8 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Lsm7Q9CQQ8 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm7Q9CQQ8 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm7Q9CQQ8 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm7Q9CQQ8 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm7Q9CQQ8 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm7Q9CQQ8 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.97□□□□□ -0.01
Lsm7Q9CQQ8 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm7Q9CQQ8 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Lsm7Q9CQQ8 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm7Q9CQQ8 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm7Q9CQQ8 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm7Q9CQQ8 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Lsm7Q9CQQ8 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm7Q9CQQ8 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm7Q9CQQ8 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm7Q9CQQ8 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Lsm7Q9CQQ8 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Lsm7Q9CQQ8 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm7Q9CQQ8 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lsm7Q9CQQ8 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lsm7Q9CQQ8 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lsm7Q9CQQ8 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Lsm7Q9CQQ8 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lsm7Q9CQQ8 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lsm7Q9CQQ8 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lsm7Q9CQQ8 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lsm7Q9CQQ8 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lsm7Q9CQQ8 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lsm7Q9CQQ8 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.96□□□□□ -0.01
Lsm7Q9CQQ8 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Lsm7Q9CQQ8 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.96□□□□□ -0.01
Lsm7Q9CQQ8 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lsm7Q9CQQ8 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lsm7Q9CQQ8 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lsm7Q9CQQ8 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Lsm7Q9CQQ8 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Lsm7Q9CQQ8 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms