Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Krt88Q9CPR6 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Krt88Q9CPR6 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Krt88Q9CPR6 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.43□□□□□ -0.26
Krt88Q9CPR6 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.43□□□□□ -0.26
Krt88Q9CPR6 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Krt88Q9CPR6 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Krt88Q9CPR6 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Krt88Q9CPR6 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Krt88Q9CPR6 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Krt88Q9CPR6 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Krt88Q9CPR6 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Krt88Q9CPR6 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Krt88Q9CPR6 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Krt88Q9CPR6 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Krt88Q9CPR6 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Krt88Q9CPR6 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Krt88Q9CPR6 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Krt88Q9CPR6 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Krt88Q9CPR6 Grk6-207ENSMUST00000225925 2769 ntBASIC13.43□□□□□ -0.26
Krt88Q9CPR6 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Krt88Q9CPR6 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Krt88Q9CPR6 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Krt88Q9CPR6 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Krt88Q9CPR6 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Krt88Q9CPR6 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Krt88Q9CPR6 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Krt88Q9CPR6 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.42□□□□□ -0.26
Krt88Q9CPR6 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Krt88Q9CPR6 Gm8318-201ENSMUST00000182954 872 ntBASIC13.42□□□□□ -0.26
Krt88Q9CPR6 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Krt88Q9CPR6 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Krt88Q9CPR6 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
Krt88Q9CPR6 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.42□□□□□ -0.26
Krt88Q9CPR6 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Krt88Q9CPR6 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Krt88Q9CPR6 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Krt88Q9CPR6 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Krt88Q9CPR6 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Krt88Q9CPR6 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Krt88Q9CPR6 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Krt88Q9CPR6 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Krt88Q9CPR6 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Krt88Q9CPR6 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.42□□□□□ -0.26
Krt88Q9CPR6 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Krt88Q9CPR6 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Krt88Q9CPR6 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Krt88Q9CPR6 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Krt88Q9CPR6 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Krt88Q9CPR6 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Krt88Q9CPR6 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Krt88Q9CPR6 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Krt88Q9CPR6 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Krt88Q9CPR6 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Krt88Q9CPR6 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Krt88Q9CPR6 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Krt88Q9CPR6 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Krt88Q9CPR6 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC13.41□□□□□ -0.26
Krt88Q9CPR6 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Krt88Q9CPR6 Gm6659-201ENSMUST00000174752 547 ntBASIC13.41□□□□□ -0.26
Krt88Q9CPR6 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC13.41□□□□□ -0.26
Krt88Q9CPR6 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Krt88Q9CPR6 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.41□□□□□ -0.26
Krt88Q9CPR6 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Krt88Q9CPR6 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Krt88Q9CPR6 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Krt88Q9CPR6 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Krt88Q9CPR6 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Krt88Q9CPR6 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Krt88Q9CPR6 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Krt88Q9CPR6 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Krt88Q9CPR6 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Krt88Q9CPR6 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Krt88Q9CPR6 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Krt88Q9CPR6 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Krt88Q9CPR6 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Krt88Q9CPR6 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Krt88Q9CPR6 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Krt88Q9CPR6 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Krt88Q9CPR6 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Krt88Q9CPR6 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Krt88Q9CPR6 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Krt88Q9CPR6 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Krt88Q9CPR6 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Krt88Q9CPR6 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Krt88Q9CPR6 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Krt88Q9CPR6 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Krt88Q9CPR6 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Krt88Q9CPR6 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Krt88Q9CPR6 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Krt88Q9CPR6 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC13.4□□□□□ -0.26
Krt88Q9CPR6 Gm15794-201ENSMUST00000120182 631 ntBASIC13.4□□□□□ -0.26
Krt88Q9CPR6 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Krt88Q9CPR6 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC13.4□□□□□ -0.26
Krt88Q9CPR6 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC13.4□□□□□ -0.26
Krt88Q9CPR6 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Krt88Q9CPR6 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Krt88Q9CPR6 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Krt88Q9CPR6 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Krt88Q9CPR6 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms