Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rtn4Q99P72 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rtn4Q99P72 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rtn4Q99P72 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rtn4Q99P72 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Rtn4Q99P72 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rtn4Q99P72 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Rtn4Q99P72 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rtn4Q99P72 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rtn4Q99P72 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC19.09■□□□□ 0.65
Rtn4Q99P72 CT572999.1-201ENSMUST00000220315 1260 ntBASIC19.09■□□□□ 0.65
Rtn4Q99P72 Gm15500-202ENSMUST00000071641 1019 ntBASIC19.09■□□□□ 0.65
Rtn4Q99P72 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Rtn4Q99P72 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Rtn4Q99P72 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rtn4Q99P72 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rtn4Q99P72 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rtn4Q99P72 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rtn4Q99P72 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC19.09■□□□□ 0.65
Rtn4Q99P72 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rtn4Q99P72 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rtn4Q99P72 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rtn4Q99P72 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rtn4Q99P72 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rtn4Q99P72 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rtn4Q99P72 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Rtn4Q99P72 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Rtn4Q99P72 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.65
Rtn4Q99P72 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rtn4Q99P72 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC19.08■□□□□ 0.64
Rtn4Q99P72 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Rtn4Q99P72 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Rtn4Q99P72 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC19.08■□□□□ 0.64
Rtn4Q99P72 Gm17968-201ENSMUST00000194902 784 ntBASIC19.08■□□□□ 0.64
Rtn4Q99P72 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC19.08■□□□□ 0.64
Rtn4Q99P72 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC19.08■□□□□ 0.64
Rtn4Q99P72 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rtn4Q99P72 AC158538.2-201ENSMUST00000225455 906 ntBASIC19.08■□□□□ 0.64
Rtn4Q99P72 AC154621.1-201ENSMUST00000226155 1119 ntBASIC19.08■□□□□ 0.64
Rtn4Q99P72 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rtn4Q99P72 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rtn4Q99P72 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Rtn4Q99P72 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rtn4Q99P72 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rtn4Q99P72 Gm44729-201ENSMUST00000206759 2052 ntBASIC19.08■□□□□ 0.64
Rtn4Q99P72 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rtn4Q99P72 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rtn4Q99P72 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rtn4Q99P72 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rtn4Q99P72 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rtn4Q99P72 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Rtn4Q99P72 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC19.08■□□□□ 0.64
Rtn4Q99P72 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rtn4Q99P72 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Rtn4Q99P72 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rtn4Q99P72 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC19.07■□□□□ 0.64
Rtn4Q99P72 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC19.07■□□□□ 0.64
Rtn4Q99P72 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC19.07■□□□□ 0.64
Rtn4Q99P72 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
Rtn4Q99P72 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rtn4Q99P72 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC19.07■□□□□ 0.64
Rtn4Q99P72 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC19.07■□□□□ 0.64
Rtn4Q99P72 AC127302.2-201ENSMUST00000215212 268 ntBASIC19.07■□□□□ 0.64
Rtn4Q99P72 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rtn4Q99P72 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rtn4Q99P72 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rtn4Q99P72 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC19.07■□□□□ 0.64
Rtn4Q99P72 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rtn4Q99P72 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rtn4Q99P72 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rtn4Q99P72 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rtn4Q99P72 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rtn4Q99P72 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rtn4Q99P72 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rtn4Q99P72 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rtn4Q99P72 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rtn4Q99P72 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rtn4Q99P72 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
Rtn4Q99P72 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rtn4Q99P72 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC19.06■□□□□ 0.64
Rtn4Q99P72 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rtn4Q99P72 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC19.06■□□□□ 0.64
Rtn4Q99P72 Gm7286-201ENSMUST00000182691 1007 ntBASIC19.06■□□□□ 0.64
Rtn4Q99P72 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC19.06■□□□□ 0.64
Rtn4Q99P72 Gm32296-201ENSMUST00000220590 1057 ntTSL 3 BASIC19.06■□□□□ 0.64
Rtn4Q99P72 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rtn4Q99P72 Hesx1-201ENSMUST00000035433 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rtn4Q99P72 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rtn4Q99P72 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rtn4Q99P72 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC19.06■□□□□ 0.64
Rtn4Q99P72 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rtn4Q99P72 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rtn4Q99P72 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC19.06■□□□□ 0.64
Rtn4Q99P72 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rtn4Q99P72 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Rtn4Q99P72 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC19.06■□□□□ 0.64
Rtn4Q99P72 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rtn4Q99P72 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rtn4Q99P72 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rtn4Q99P72 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms