Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Gtf2ird2Q99NI3 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Gtf2ird2Q99NI3 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Gtf2ird2Q99NI3 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gtf2ird2Q99NI3 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Gtf2ird2Q99NI3 Gm20553-201ENSMUST00000204205 844 ntBASIC15.27■□□□□ 0.04
Gtf2ird2Q99NI3 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC15.27■□□□□ 0.04
Gtf2ird2Q99NI3 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC15.27■□□□□ 0.04
Gtf2ird2Q99NI3 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC15.27■□□□□ 0.04
Gtf2ird2Q99NI3 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Gtf2ird2Q99NI3 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Gtf2ird2Q99NI3 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Gtf2ird2Q99NI3 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gtf2ird2Q99NI3 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.27■□□□□ 0.03
Gtf2ird2Q99NI3 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gtf2ird2Q99NI3 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Gtf2ird2Q99NI3 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Gtf2ird2Q99NI3 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC15.27■□□□□ 0.03
Gtf2ird2Q99NI3 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gtf2ird2Q99NI3 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gtf2ird2Q99NI3 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC15.27■□□□□ 0.03
Gtf2ird2Q99NI3 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Gtf2ird2Q99NI3 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gtf2ird2Q99NI3 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
Gtf2ird2Q99NI3 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Gtf2ird2Q99NI3 AC126250.1-201ENSMUST00000228343 1768 ntBASIC15.26■□□□□ 0.03
Gtf2ird2Q99NI3 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gtf2ird2Q99NI3 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gtf2ird2Q99NI3 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gtf2ird2Q99NI3 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gtf2ird2Q99NI3 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Gtf2ird2Q99NI3 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Gtf2ird2Q99NI3 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Gtf2ird2Q99NI3 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.26■□□□□ 0.03
Gtf2ird2Q99NI3 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gtf2ird2Q99NI3 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.26■□□□□ 0.03
Gtf2ird2Q99NI3 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.26■□□□□ 0.03
Gtf2ird2Q99NI3 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gtf2ird2Q99NI3 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Gtf2ird2Q99NI3 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gtf2ird2Q99NI3 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC15.26■□□□□ 0.03
Gtf2ird2Q99NI3 Gm11745-201ENSMUST00000121669 448 ntBASIC15.26■□□□□ 0.03
Gtf2ird2Q99NI3 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Gtf2ird2Q99NI3 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC15.26■□□□□ 0.03
Gtf2ird2Q99NI3 Gm5628-201ENSMUST00000222318 1049 ntBASIC15.26■□□□□ 0.03
Gtf2ird2Q99NI3 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC15.26■□□□□ 0.03
Gtf2ird2Q99NI3 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gtf2ird2Q99NI3 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gtf2ird2Q99NI3 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gtf2ird2Q99NI3 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gtf2ird2Q99NI3 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Gtf2ird2Q99NI3 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gtf2ird2Q99NI3 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gtf2ird2Q99NI3 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Gtf2ird2Q99NI3 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gtf2ird2Q99NI3 Gm45760-201ENSMUST00000212190 1782 ntBASIC15.26■□□□□ 0.03
Gtf2ird2Q99NI3 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gtf2ird2Q99NI3 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC15.26■□□□□ 0.03
Gtf2ird2Q99NI3 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gtf2ird2Q99NI3 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gtf2ird2Q99NI3 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gtf2ird2Q99NI3 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gtf2ird2Q99NI3 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Gtf2ird2Q99NI3 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.25■□□□□ 0.03
Gtf2ird2Q99NI3 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gtf2ird2Q99NI3 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gtf2ird2Q99NI3 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gtf2ird2Q99NI3 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gtf2ird2Q99NI3 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.25■□□□□ 0.03
Gtf2ird2Q99NI3 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gtf2ird2Q99NI3 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gtf2ird2Q99NI3 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Gtf2ird2Q99NI3 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gtf2ird2Q99NI3 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gtf2ird2Q99NI3 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Gtf2ird2Q99NI3 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Gtf2ird2Q99NI3 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC15.25■□□□□ 0.03
Gtf2ird2Q99NI3 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gtf2ird2Q99NI3 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gtf2ird2Q99NI3 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Gtf2ird2Q99NI3 Mxra8os-201ENSMUST00000097740 687 ntBASIC15.25■□□□□ 0.03
Gtf2ird2Q99NI3 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gtf2ird2Q99NI3 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC15.25■□□□□ 0.03
Gtf2ird2Q99NI3 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gtf2ird2Q99NI3 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.25■□□□□ 0.03
Gtf2ird2Q99NI3 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gtf2ird2Q99NI3 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Gtf2ird2Q99NI3 Gm13332-201ENSMUST00000120451 1398 ntBASIC15.24■□□□□ 0.03
Gtf2ird2Q99NI3 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gtf2ird2Q99NI3 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gtf2ird2Q99NI3 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gtf2ird2Q99NI3 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.24■□□□□ 0.03
Gtf2ird2Q99NI3 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Gtf2ird2Q99NI3 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gtf2ird2Q99NI3 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gtf2ird2Q99NI3 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gtf2ird2Q99NI3 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gtf2ird2Q99NI3 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gtf2ird2Q99NI3 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Gtf2ird2Q99NI3 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms