Protein–RNA interactions for Protein: Q99N13

Hdac9, Histone deacetylase 9, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac9Q99N13 Gm14928-201ENSMUST00000120198 477 ntBASIC17.41■□□□□ 0.38
Hdac9Q99N13 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Hdac9Q99N13 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Hdac9Q99N13 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Hdac9Q99N13 Gm3436-201ENSMUST00000179930 840 ntBASIC17.41■□□□□ 0.38
Hdac9Q99N13 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC17.41■□□□□ 0.38
Hdac9Q99N13 Gm6473-201ENSMUST00000188572 1210 ntBASIC17.41■□□□□ 0.38
Hdac9Q99N13 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC17.41■□□□□ 0.38
Hdac9Q99N13 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC17.41■□□□□ 0.38
Hdac9Q99N13 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC17.41■□□□□ 0.38
Hdac9Q99N13 Gm16476-201ENSMUST00000221544 139 ntBASIC17.41■□□□□ 0.38
Hdac9Q99N13 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hdac9Q99N13 Gm20445-201ENSMUST00000061905 565 ntBASIC17.41■□□□□ 0.38
Hdac9Q99N13 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Hdac9Q99N13 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hdac9Q99N13 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hdac9Q99N13 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hdac9Q99N13 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC17.41■□□□□ 0.38
Hdac9Q99N13 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hdac9Q99N13 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hdac9Q99N13 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hdac9Q99N13 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hdac9Q99N13 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hdac9Q99N13 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hdac9Q99N13 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hdac9Q99N13 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC17.4■□□□□ 0.38
Hdac9Q99N13 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hdac9Q99N13 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
Hdac9Q99N13 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hdac9Q99N13 Gm4875-201ENSMUST00000118257 786 ntBASIC17.4■□□□□ 0.38
Hdac9Q99N13 Gm13464-201ENSMUST00000119418 935 ntBASIC17.4■□□□□ 0.38
Hdac9Q99N13 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Hdac9Q99N13 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hdac9Q99N13 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hdac9Q99N13 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC17.4■□□□□ 0.38
Hdac9Q99N13 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC17.4■□□□□ 0.38
Hdac9Q99N13 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC17.4■□□□□ 0.38
Hdac9Q99N13 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC17.4■□□□□ 0.38
Hdac9Q99N13 Dupd1-202ENSMUST00000224735 548 ntBASIC17.4■□□□□ 0.38
Hdac9Q99N13 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hdac9Q99N13 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Hdac9Q99N13 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC17.4■□□□□ 0.38
Hdac9Q99N13 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC17.4■□□□□ 0.38
Hdac9Q99N13 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hdac9Q99N13 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Hdac9Q99N13 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hdac9Q99N13 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Hdac9Q99N13 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hdac9Q99N13 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hdac9Q99N13 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC17.4■□□□□ 0.38
Hdac9Q99N13 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hdac9Q99N13 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hdac9Q99N13 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Hdac9Q99N13 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC17.39■□□□□ 0.38
Hdac9Q99N13 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC17.39■□□□□ 0.38
Hdac9Q99N13 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Hdac9Q99N13 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC17.39■□□□□ 0.38
Hdac9Q99N13 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hdac9Q99N13 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Hdac9Q99N13 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hdac9Q99N13 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Hdac9Q99N13 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hdac9Q99N13 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
Hdac9Q99N13 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hdac9Q99N13 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC17.39■□□□□ 0.37
Hdac9Q99N13 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
Hdac9Q99N13 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC17.39■□□□□ 0.37
Hdac9Q99N13 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC17.39■□□□□ 0.37
Hdac9Q99N13 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC17.39■□□□□ 0.37
Hdac9Q99N13 AC154239.3-201ENSMUST00000226933 674 ntBASIC17.39■□□□□ 0.37
Hdac9Q99N13 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hdac9Q99N13 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hdac9Q99N13 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.39■□□□□ 0.37
Hdac9Q99N13 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hdac9Q99N13 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hdac9Q99N13 Gm6263-201ENSMUST00000120029 1342 ntBASIC17.39■□□□□ 0.37
Hdac9Q99N13 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hdac9Q99N13 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hdac9Q99N13 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Hdac9Q99N13 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Hdac9Q99N13 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hdac9Q99N13 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hdac9Q99N13 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Hdac9Q99N13 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Hdac9Q99N13 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Hdac9Q99N13 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hdac9Q99N13 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hdac9Q99N13 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hdac9Q99N13 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hdac9Q99N13 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC17.38■□□□□ 0.37
Hdac9Q99N13 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hdac9Q99N13 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Hdac9Q99N13 Gm18187-201ENSMUST00000196476 984 ntBASIC17.38■□□□□ 0.37
Hdac9Q99N13 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC17.38■□□□□ 0.37
Hdac9Q99N13 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hdac9Q99N13 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hdac9Q99N13 Gm5357-201ENSMUST00000212720 1924 ntBASIC17.38■□□□□ 0.37
Hdac9Q99N13 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
Hdac9Q99N13 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hdac9Q99N13 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms