Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC18.23■□□□□ 0.51
RtcbQ99LF4 Gm9002-201ENSMUST00000178437 499 ntBASIC18.23■□□□□ 0.51
RtcbQ99LF4 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RtcbQ99LF4 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC18.23■□□□□ 0.51
RtcbQ99LF4 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RtcbQ99LF4 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
RtcbQ99LF4 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RtcbQ99LF4 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
RtcbQ99LF4 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC18.23■□□□□ 0.51
RtcbQ99LF4 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
RtcbQ99LF4 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
RtcbQ99LF4 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
RtcbQ99LF4 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RtcbQ99LF4 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC18.23■□□□□ 0.51
RtcbQ99LF4 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RtcbQ99LF4 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC18.22■□□□□ 0.51
RtcbQ99LF4 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RtcbQ99LF4 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RtcbQ99LF4 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RtcbQ99LF4 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RtcbQ99LF4 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RtcbQ99LF4 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RtcbQ99LF4 Trav13-3-201ENSMUST00000117226 336 ntBASIC18.22■□□□□ 0.51
RtcbQ99LF4 Ldha-ps-201ENSMUST00000119390 995 ntBASIC18.22■□□□□ 0.51
RtcbQ99LF4 Gm12960-201ENSMUST00000120017 1066 ntBASIC18.22■□□□□ 0.51
RtcbQ99LF4 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RtcbQ99LF4 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC18.22■□□□□ 0.51
RtcbQ99LF4 Gm43630-201ENSMUST00000201550 776 ntBASIC18.22■□□□□ 0.51
RtcbQ99LF4 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RtcbQ99LF4 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC18.22■□□□□ 0.51
RtcbQ99LF4 Gm9182-201ENSMUST00000217829 639 ntBASIC18.22■□□□□ 0.51
RtcbQ99LF4 AC159006.1-201ENSMUST00000226396 258 ntBASIC18.22■□□□□ 0.51
RtcbQ99LF4 Gm10313-201ENSMUST00000095320 1002 ntBASIC18.22■□□□□ 0.51
RtcbQ99LF4 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RtcbQ99LF4 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RtcbQ99LF4 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RtcbQ99LF4 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RtcbQ99LF4 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RtcbQ99LF4 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
RtcbQ99LF4 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RtcbQ99LF4 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
RtcbQ99LF4 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
RtcbQ99LF4 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RtcbQ99LF4 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RtcbQ99LF4 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
RtcbQ99LF4 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
RtcbQ99LF4 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC18.21■□□□□ 0.51
RtcbQ99LF4 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RtcbQ99LF4 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RtcbQ99LF4 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RtcbQ99LF4 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
RtcbQ99LF4 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RtcbQ99LF4 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RtcbQ99LF4 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
RtcbQ99LF4 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
RtcbQ99LF4 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RtcbQ99LF4 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RtcbQ99LF4 Gm8749-201ENSMUST00000117737 331 ntBASIC18.21■□□□□ 0.51
RtcbQ99LF4 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RtcbQ99LF4 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC18.21■□□□□ 0.51
RtcbQ99LF4 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC18.21■□□□□ 0.51
RtcbQ99LF4 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC18.21■□□□□ 0.51
RtcbQ99LF4 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RtcbQ99LF4 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC18.21■□□□□ 0.51
RtcbQ99LF4 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC18.21■□□□□ 0.51
RtcbQ99LF4 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC18.21■□□□□ 0.51
RtcbQ99LF4 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
RtcbQ99LF4 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RtcbQ99LF4 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RtcbQ99LF4 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
RtcbQ99LF4 Gm45751-201ENSMUST00000210185 1573 ntBASIC18.21■□□□□ 0.51
RtcbQ99LF4 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
RtcbQ99LF4 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.5
RtcbQ99LF4 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RtcbQ99LF4 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
RtcbQ99LF4 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RtcbQ99LF4 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RtcbQ99LF4 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
RtcbQ99LF4 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
RtcbQ99LF4 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RtcbQ99LF4 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RtcbQ99LF4 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
RtcbQ99LF4 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC18.2■□□□□ 0.5
RtcbQ99LF4 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RtcbQ99LF4 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RtcbQ99LF4 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC18.2■□□□□ 0.5
RtcbQ99LF4 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RtcbQ99LF4 AC154846.1-201ENSMUST00000226278 862 ntBASIC18.2■□□□□ 0.5
RtcbQ99LF4 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RtcbQ99LF4 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RtcbQ99LF4 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RtcbQ99LF4 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RtcbQ99LF4 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RtcbQ99LF4 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RtcbQ99LF4 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RtcbQ99LF4 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RtcbQ99LF4 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RtcbQ99LF4 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RtcbQ99LF4 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
RtcbQ99LF4 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms