Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vmp1Q99KU0 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Vmp1Q99KU0 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vmp1Q99KU0 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.34□□□□□ -0.11
Vmp1Q99KU0 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vmp1Q99KU0 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vmp1Q99KU0 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vmp1Q99KU0 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vmp1Q99KU0 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.34□□□□□ -0.11
Vmp1Q99KU0 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vmp1Q99KU0 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vmp1Q99KU0 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vmp1Q99KU0 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.11
Vmp1Q99KU0 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vmp1Q99KU0 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vmp1Q99KU0 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Vmp1Q99KU0 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.33□□□□□ -0.11
Vmp1Q99KU0 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vmp1Q99KU0 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.33□□□□□ -0.12
Vmp1Q99KU0 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vmp1Q99KU0 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vmp1Q99KU0 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vmp1Q99KU0 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Vmp1Q99KU0 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vmp1Q99KU0 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.33□□□□□ -0.12
Vmp1Q99KU0 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Vmp1Q99KU0 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vmp1Q99KU0 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.33□□□□□ -0.12
Vmp1Q99KU0 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.33□□□□□ -0.12
Vmp1Q99KU0 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Vmp1Q99KU0 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Vmp1Q99KU0 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Vmp1Q99KU0 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.33□□□□□ -0.12
Vmp1Q99KU0 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.33□□□□□ -0.12
Vmp1Q99KU0 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Vmp1Q99KU0 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Vmp1Q99KU0 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Vmp1Q99KU0 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Vmp1Q99KU0 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vmp1Q99KU0 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vmp1Q99KU0 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vmp1Q99KU0 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Vmp1Q99KU0 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vmp1Q99KU0 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.33□□□□□ -0.12
Vmp1Q99KU0 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Vmp1Q99KU0 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.33□□□□□ -0.12
Vmp1Q99KU0 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vmp1Q99KU0 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Vmp1Q99KU0 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vmp1Q99KU0 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.32□□□□□ -0.12
Vmp1Q99KU0 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Vmp1Q99KU0 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vmp1Q99KU0 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vmp1Q99KU0 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vmp1Q99KU0 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vmp1Q99KU0 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vmp1Q99KU0 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vmp1Q99KU0 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.32□□□□□ -0.12
Vmp1Q99KU0 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Vmp1Q99KU0 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vmp1Q99KU0 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vmp1Q99KU0 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.32□□□□□ -0.12
Vmp1Q99KU0 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.32□□□□□ -0.12
Vmp1Q99KU0 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.32□□□□□ -0.12
Vmp1Q99KU0 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vmp1Q99KU0 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vmp1Q99KU0 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vmp1Q99KU0 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Vmp1Q99KU0 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vmp1Q99KU0 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Vmp1Q99KU0 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vmp1Q99KU0 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vmp1Q99KU0 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vmp1Q99KU0 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vmp1Q99KU0 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vmp1Q99KU0 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vmp1Q99KU0 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Vmp1Q99KU0 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vmp1Q99KU0 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vmp1Q99KU0 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Vmp1Q99KU0 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vmp1Q99KU0 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vmp1Q99KU0 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vmp1Q99KU0 Efs-202ENSMUST00000227037 2540 ntBASIC14.31□□□□□ -0.12
Vmp1Q99KU0 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vmp1Q99KU0 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.31□□□□□ -0.12
Vmp1Q99KU0 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.31□□□□□ -0.12
Vmp1Q99KU0 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vmp1Q99KU0 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.31□□□□□ -0.12
Vmp1Q99KU0 Gm27628-201ENSMUST00000184911 107 ntBASIC14.31□□□□□ -0.12
Vmp1Q99KU0 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.31□□□□□ -0.12
Vmp1Q99KU0 AW822252-206ENSMUST00000208904 237 ntBASIC14.31□□□□□ -0.12
Vmp1Q99KU0 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.31□□□□□ -0.12
Vmp1Q99KU0 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Vmp1Q99KU0 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vmp1Q99KU0 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vmp1Q99KU0 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vmp1Q99KU0 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vmp1Q99KU0 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vmp1Q99KU0 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms