Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdk9Q99J95 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdk9Q99J95 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.99□□□□□ -0.01
Cdk9Q99J95 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdk9Q99J95 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdk9Q99J95 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdk9Q99J95 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cdk9Q99J95 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.99□□□□□ -0.01
Cdk9Q99J95 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdk9Q99J95 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdk9Q99J95 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdk9Q99J95 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Cdk9Q99J95 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdk9Q99J95 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdk9Q99J95 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdk9Q99J95 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdk9Q99J95 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.99□□□□□ -0.01
Cdk9Q99J95 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdk9Q99J95 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cdk9Q99J95 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdk9Q99J95 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdk9Q99J95 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.98□□□□□ -0.01
Cdk9Q99J95 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdk9Q99J95 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdk9Q99J95 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdk9Q99J95 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cdk9Q99J95 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.98□□□□□ -0.01
Cdk9Q99J95 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Cdk9Q99J95 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Cdk9Q99J95 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cdk9Q99J95 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdk9Q99J95 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdk9Q99J95 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdk9Q99J95 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.98□□□□□ -0.01
Cdk9Q99J95 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdk9Q99J95 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Cdk9Q99J95 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cdk9Q99J95 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cdk9Q99J95 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.98□□□□□ -0.01
Cdk9Q99J95 Gm45328-201ENSMUST00000210942 917 ntBASIC14.98□□□□□ -0.01
Cdk9Q99J95 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Cdk9Q99J95 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Cdk9Q99J95 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdk9Q99J95 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdk9Q99J95 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.98□□□□□ -0.01
Cdk9Q99J95 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdk9Q99J95 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.98□□□□□ -0.01
Cdk9Q99J95 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdk9Q99J95 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Cdk9Q99J95 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.98□□□□□ -0.01
Cdk9Q99J95 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdk9Q99J95 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cdk9Q99J95 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Cdk9Q99J95 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cdk9Q99J95 Matn2-206ENSMUST00000228570 2798 ntBASIC14.97□□□□□ -0.01
Cdk9Q99J95 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdk9Q99J95 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdk9Q99J95 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdk9Q99J95 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.97□□□□□ -0.01
Cdk9Q99J95 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdk9Q99J95 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cdk9Q99J95 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdk9Q99J95 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdk9Q99J95 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Cdk9Q99J95 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdk9Q99J95 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cdk9Q99J95 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cdk9Q99J95 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Cdk9Q99J95 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdk9Q99J95 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC14.97□□□□□ -0.01
Cdk9Q99J95 Ank2-226ENSMUST00000189368 339 ntBASIC14.97□□□□□ -0.01
Cdk9Q99J95 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cdk9Q99J95 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdk9Q99J95 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cdk9Q99J95 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdk9Q99J95 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cdk9Q99J95 Carlr-201ENSMUST00000181515 2574 ntBASIC14.97□□□□□ -0.01
Cdk9Q99J95 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Cdk9Q99J95 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdk9Q99J95 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdk9Q99J95 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cdk9Q99J95 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdk9Q99J95 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdk9Q99J95 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdk9Q99J95 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Cdk9Q99J95 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdk9Q99J95 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Cdk9Q99J95 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdk9Q99J95 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.96□□□□□ -0.01
Cdk9Q99J95 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdk9Q99J95 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdk9Q99J95 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdk9Q99J95 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.96□□□□□ -0.01
Cdk9Q99J95 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Cdk9Q99J95 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdk9Q99J95 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdk9Q99J95 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Cdk9Q99J95 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdk9Q99J95 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdk9Q99J95 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms