Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdha8Q91Y12 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdha8Q91Y12 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdha8Q91Y12 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Pcdha8Q91Y12 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdha8Q91Y12 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.48□□□□□ -0.09
Pcdha8Q91Y12 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Pcdha8Q91Y12 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdha8Q91Y12 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdha8Q91Y12 Gm27628-201ENSMUST00000184911 107 ntBASIC14.48□□□□□ -0.09
Pcdha8Q91Y12 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.48□□□□□ -0.09
Pcdha8Q91Y12 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdha8Q91Y12 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdha8Q91Y12 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdha8Q91Y12 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdha8Q91Y12 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdha8Q91Y12 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdha8Q91Y12 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.48□□□□□ -0.09
Pcdha8Q91Y12 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdha8Q91Y12 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdha8Q91Y12 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdha8Q91Y12 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdha8Q91Y12 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdha8Q91Y12 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdha8Q91Y12 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdha8Q91Y12 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdha8Q91Y12 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdha8Q91Y12 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Pcdha8Q91Y12 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdha8Q91Y12 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdha8Q91Y12 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdha8Q91Y12 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdha8Q91Y12 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdha8Q91Y12 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdha8Q91Y12 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdha8Q91Y12 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdha8Q91Y12 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Pcdha8Q91Y12 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Pcdha8Q91Y12 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdha8Q91Y12 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdha8Q91Y12 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Pcdha8Q91Y12 Gm12134-201ENSMUST00000122109 520 ntBASIC14.47□□□□□ -0.09
Pcdha8Q91Y12 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdha8Q91Y12 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.47□□□□□ -0.09
Pcdha8Q91Y12 Gm18246-201ENSMUST00000221023 728 ntBASIC14.47□□□□□ -0.09
Pcdha8Q91Y12 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.47□□□□□ -0.09
Pcdha8Q91Y12 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdha8Q91Y12 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdha8Q91Y12 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdha8Q91Y12 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdha8Q91Y12 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdha8Q91Y12 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Pcdha8Q91Y12 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdha8Q91Y12 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdha8Q91Y12 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Pcdha8Q91Y12 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdha8Q91Y12 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Pcdha8Q91Y12 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Pcdha8Q91Y12 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdha8Q91Y12 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.47□□□□□ -0.09
Pcdha8Q91Y12 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdha8Q91Y12 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdha8Q91Y12 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Pcdha8Q91Y12 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdha8Q91Y12 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Pcdha8Q91Y12 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.46□□□□□ -0.09
Pcdha8Q91Y12 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.46□□□□□ -0.09
Pcdha8Q91Y12 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Pcdha8Q91Y12 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdha8Q91Y12 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.46□□□□□ -0.09
Pcdha8Q91Y12 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdha8Q91Y12 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdha8Q91Y12 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdha8Q91Y12 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdha8Q91Y12 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdha8Q91Y12 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.46□□□□□ -0.09
Pcdha8Q91Y12 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Pcdha8Q91Y12 Gm43767-201ENSMUST00000198933 381 ntBASIC14.46□□□□□ -0.09
Pcdha8Q91Y12 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdha8Q91Y12 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdha8Q91Y12 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Pcdha8Q91Y12 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdha8Q91Y12 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
Pcdha8Q91Y12 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.46□□□□□ -0.09
Pcdha8Q91Y12 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Pcdha8Q91Y12 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdha8Q91Y12 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdha8Q91Y12 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.46□□□□□ -0.1
Pcdha8Q91Y12 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdha8Q91Y12 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.46□□□□□ -0.1
Pcdha8Q91Y12 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdha8Q91Y12 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdha8Q91Y12 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.46□□□□□ -0.1
Pcdha8Q91Y12 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.1
Pcdha8Q91Y12 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.46□□□□□ -0.1
Pcdha8Q91Y12 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdha8Q91Y12 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Pcdha8Q91Y12 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdha8Q91Y12 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdha8Q91Y12 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms