Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Pcdha9Q91Y11 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdha9Q91Y11 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdha9Q91Y11 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.78■□□□□ 0.12
Pcdha9Q91Y11 AC164565.1-201ENSMUST00000217520 1484 ntBASIC15.78■□□□□ 0.12
Pcdha9Q91Y11 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdha9Q91Y11 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdha9Q91Y11 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdha9Q91Y11 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdha9Q91Y11 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdha9Q91Y11 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC15.77■□□□□ 0.12
Pcdha9Q91Y11 Gm4995-201ENSMUST00000117247 432 ntBASIC15.77■□□□□ 0.12
Pcdha9Q91Y11 Gm11594-201ENSMUST00000122313 162 ntBASIC15.77■□□□□ 0.12
Pcdha9Q91Y11 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdha9Q91Y11 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdha9Q91Y11 CT030684.1-201ENSMUST00000227292 914 ntBASIC15.77■□□□□ 0.12
Pcdha9Q91Y11 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdha9Q91Y11 Gpr146-202ENSMUST00000053120 1040 ntBASIC15.77■□□□□ 0.12
Pcdha9Q91Y11 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdha9Q91Y11 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdha9Q91Y11 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdha9Q91Y11 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdha9Q91Y11 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdha9Q91Y11 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdha9Q91Y11 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC15.77■□□□□ 0.11
Pcdha9Q91Y11 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdha9Q91Y11 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdha9Q91Y11 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Pcdha9Q91Y11 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC15.76■□□□□ 0.11
Pcdha9Q91Y11 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdha9Q91Y11 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdha9Q91Y11 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdha9Q91Y11 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdha9Q91Y11 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Pcdha9Q91Y11 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdha9Q91Y11 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdha9Q91Y11 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.76■□□□□ 0.11
Pcdha9Q91Y11 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdha9Q91Y11 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdha9Q91Y11 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdha9Q91Y11 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC15.76■□□□□ 0.11
Pcdha9Q91Y11 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdha9Q91Y11 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdha9Q91Y11 CT943659.1-201ENSMUST00000215459 326 ntBASIC15.76■□□□□ 0.11
Pcdha9Q91Y11 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC15.76■□□□□ 0.11
Pcdha9Q91Y11 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC15.76■□□□□ 0.11
Pcdha9Q91Y11 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdha9Q91Y11 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdha9Q91Y11 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdha9Q91Y11 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdha9Q91Y11 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.76■□□□□ 0.11
Pcdha9Q91Y11 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC15.76■□□□□ 0.11
Pcdha9Q91Y11 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdha9Q91Y11 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdha9Q91Y11 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Pcdha9Q91Y11 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdha9Q91Y11 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdha9Q91Y11 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdha9Q91Y11 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Pcdha9Q91Y11 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
Pcdha9Q91Y11 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
Pcdha9Q91Y11 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdha9Q91Y11 Gm9726-201ENSMUST00000180321 678 ntBASIC15.75■□□□□ 0.11
Pcdha9Q91Y11 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC15.75■□□□□ 0.11
Pcdha9Q91Y11 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC15.75■□□□□ 0.11
Pcdha9Q91Y11 AC132104.2-201ENSMUST00000215011 266 ntBASIC15.75■□□□□ 0.11
Pcdha9Q91Y11 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdha9Q91Y11 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdha9Q91Y11 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdha9Q91Y11 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC15.75■□□□□ 0.11
Pcdha9Q91Y11 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdha9Q91Y11 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdha9Q91Y11 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdha9Q91Y11 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdha9Q91Y11 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Pcdha9Q91Y11 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdha9Q91Y11 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdha9Q91Y11 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdha9Q91Y11 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdha9Q91Y11 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdha9Q91Y11 Nrn1-204ENSMUST00000224323 1779 ntBASIC15.75■□□□□ 0.11
Pcdha9Q91Y11 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdha9Q91Y11 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Pcdha9Q91Y11 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdha9Q91Y11 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.74■□□□□ 0.11
Pcdha9Q91Y11 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdha9Q91Y11 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdha9Q91Y11 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdha9Q91Y11 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdha9Q91Y11 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Pcdha9Q91Y11 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC15.74■□□□□ 0.11
Pcdha9Q91Y11 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
Pcdha9Q91Y11 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdha9Q91Y11 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdha9Q91Y11 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
Pcdha9Q91Y11 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdha9Q91Y11 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdha9Q91Y11 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdha9Q91Y11 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdha9Q91Y11 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms