Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb20Q91XZ9 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb20Q91XZ9 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb20Q91XZ9 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.51□□□□□ -0.09
Pcdhb20Q91XZ9 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.51□□□□□ -0.09
Pcdhb20Q91XZ9 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb20Q91XZ9 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Pcdhb20Q91XZ9 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.51□□□□□ -0.09
Pcdhb20Q91XZ9 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.51□□□□□ -0.09
Pcdhb20Q91XZ9 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb20Q91XZ9 Gm22588-201ENSMUST00000157510 140 ntBASIC14.51□□□□□ -0.09
Pcdhb20Q91XZ9 Gm25911-201ENSMUST00000157621 56 ntBASIC14.51□□□□□ -0.09
Pcdhb20Q91XZ9 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Pcdhb20Q91XZ9 H2-T24-202ENSMUST00000174063 884 ntTSL 3 BASIC14.51□□□□□ -0.09
Pcdhb20Q91XZ9 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Pcdhb20Q91XZ9 Gm27702-201ENSMUST00000184512 56 ntBASIC14.51□□□□□ -0.09
Pcdhb20Q91XZ9 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb20Q91XZ9 Gm44738-201ENSMUST00000206393 371 ntTSL 2 BASIC14.51□□□□□ -0.09
Pcdhb20Q91XZ9 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb20Q91XZ9 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.51□□□□□ -0.09
Pcdhb20Q91XZ9 Scoc-209ENSMUST00000212905 798 ntAPPRIS P3 TSL 3 BASIC14.51□□□□□ -0.09
Pcdhb20Q91XZ9 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Pcdhb20Q91XZ9 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb20Q91XZ9 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb20Q91XZ9 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.51□□□□□ -0.09
Pcdhb20Q91XZ9 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.51□□□□□ -0.09
Pcdhb20Q91XZ9 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb20Q91XZ9 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb20Q91XZ9 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb20Q91XZ9 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Pcdhb20Q91XZ9 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb20Q91XZ9 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.51□□□□□ -0.09
Pcdhb20Q91XZ9 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb20Q91XZ9 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Pcdhb20Q91XZ9 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb20Q91XZ9 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb20Q91XZ9 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Pcdhb20Q91XZ9 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb20Q91XZ9 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb20Q91XZ9 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb20Q91XZ9 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Pcdhb20Q91XZ9 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb20Q91XZ9 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb20Q91XZ9 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb20Q91XZ9 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.5□□□□□ -0.09
Pcdhb20Q91XZ9 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.5□□□□□ -0.09
Pcdhb20Q91XZ9 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb20Q91XZ9 Gm4995-201ENSMUST00000117247 432 ntBASIC14.5□□□□□ -0.09
Pcdhb20Q91XZ9 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb20Q91XZ9 Gm28258-201ENSMUST00000189033 587 ntTSL 3 BASIC14.5□□□□□ -0.09
Pcdhb20Q91XZ9 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.5□□□□□ -0.09
Pcdhb20Q91XZ9 Gm37213-201ENSMUST00000193077 586 ntBASIC14.5□□□□□ -0.09
Pcdhb20Q91XZ9 Gm45747-201ENSMUST00000212203 999 ntBASIC14.5□□□□□ -0.09
Pcdhb20Q91XZ9 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.5□□□□□ -0.09
Pcdhb20Q91XZ9 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb20Q91XZ9 Elobl-201ENSMUST00000061938 819 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb20Q91XZ9 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.5□□□□□ -0.09
Pcdhb20Q91XZ9 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb20Q91XZ9 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb20Q91XZ9 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb20Q91XZ9 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb20Q91XZ9 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb20Q91XZ9 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Pcdhb20Q91XZ9 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb20Q91XZ9 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb20Q91XZ9 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb20Q91XZ9 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb20Q91XZ9 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.5□□□□□ -0.09
Pcdhb20Q91XZ9 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb20Q91XZ9 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb20Q91XZ9 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Pcdhb20Q91XZ9 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb20Q91XZ9 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb20Q91XZ9 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb20Q91XZ9 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb20Q91XZ9 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.49□□□□□ -0.09
Pcdhb20Q91XZ9 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.49□□□□□ -0.09
Pcdhb20Q91XZ9 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb20Q91XZ9 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb20Q91XZ9 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb20Q91XZ9 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb20Q91XZ9 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb20Q91XZ9 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb20Q91XZ9 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC14.49□□□□□ -0.09
Pcdhb20Q91XZ9 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb20Q91XZ9 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
Pcdhb20Q91XZ9 Gm14822-201ENSMUST00000122247 291 ntBASIC14.49□□□□□ -0.09
Pcdhb20Q91XZ9 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb20Q91XZ9 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb20Q91XZ9 Gm28455-201ENSMUST00000189105 1290 ntBASIC14.49□□□□□ -0.09
Pcdhb20Q91XZ9 Gm37845-201ENSMUST00000194977 355 ntBASIC14.49□□□□□ -0.09
Pcdhb20Q91XZ9 Gm44421-201ENSMUST00000205064 1221 ntBASIC14.49□□□□□ -0.09
Pcdhb20Q91XZ9 Olfr489-ps1-201ENSMUST00000210404 967 ntBASIC14.49□□□□□ -0.09
Pcdhb20Q91XZ9 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC14.49□□□□□ -0.09
Pcdhb20Q91XZ9 AC154441.1-201ENSMUST00000223653 1006 ntBASIC14.49□□□□□ -0.09
Pcdhb20Q91XZ9 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb20Q91XZ9 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb20Q91XZ9 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb20Q91XZ9 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb20Q91XZ9 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms