Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb4Q91XZ6 Gm10499-201ENSMUST00000174094 934 ntBASIC14.79□□□□□ -0.04
Pcdhb4Q91XZ6 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb4Q91XZ6 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.79□□□□□ -0.04
Pcdhb4Q91XZ6 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb4Q91XZ6 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.79□□□□□ -0.04
Pcdhb4Q91XZ6 Celf4-206ENSMUST00000224553 1729 ntBASIC14.79□□□□□ -0.04
Pcdhb4Q91XZ6 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb4Q91XZ6 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb4Q91XZ6 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb4Q91XZ6 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb4Q91XZ6 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Pcdhb4Q91XZ6 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb4Q91XZ6 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb4Q91XZ6 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb4Q91XZ6 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb4Q91XZ6 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb4Q91XZ6 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb4Q91XZ6 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb4Q91XZ6 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.78□□□□□ -0.04
Pcdhb4Q91XZ6 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb4Q91XZ6 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Pcdhb4Q91XZ6 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.78□□□□□ -0.04
Pcdhb4Q91XZ6 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb4Q91XZ6 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb4Q91XZ6 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.78□□□□□ -0.04
Pcdhb4Q91XZ6 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb4Q91XZ6 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb4Q91XZ6 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
Pcdhb4Q91XZ6 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.78□□□□□ -0.04
Pcdhb4Q91XZ6 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.78□□□□□ -0.04
Pcdhb4Q91XZ6 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Pcdhb4Q91XZ6 Rps4l-201ENSMUST00000071745 943 ntBASIC14.78□□□□□ -0.04
Pcdhb4Q91XZ6 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.78□□□□□ -0.04
Pcdhb4Q91XZ6 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb4Q91XZ6 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.78□□□□□ -0.04
Pcdhb4Q91XZ6 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb4Q91XZ6 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb4Q91XZ6 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb4Q91XZ6 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb4Q91XZ6 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb4Q91XZ6 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb4Q91XZ6 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb4Q91XZ6 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb4Q91XZ6 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.77□□□□□ -0.04
Pcdhb4Q91XZ6 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb4Q91XZ6 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb4Q91XZ6 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb4Q91XZ6 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb4Q91XZ6 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb4Q91XZ6 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb4Q91XZ6 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb4Q91XZ6 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb4Q91XZ6 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb4Q91XZ6 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb4Q91XZ6 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb4Q91XZ6 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.77□□□□□ -0.05
Pcdhb4Q91XZ6 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Pcdhb4Q91XZ6 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.77□□□□□ -0.05
Pcdhb4Q91XZ6 Gm18489-201ENSMUST00000172565 551 ntBASIC14.77□□□□□ -0.05
Pcdhb4Q91XZ6 Gm5682-201ENSMUST00000173402 505 ntBASIC14.77□□□□□ -0.05
Pcdhb4Q91XZ6 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.77□□□□□ -0.05
Pcdhb4Q91XZ6 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb4Q91XZ6 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb4Q91XZ6 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb4Q91XZ6 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb4Q91XZ6 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb4Q91XZ6 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb4Q91XZ6 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.05
Pcdhb4Q91XZ6 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb4Q91XZ6 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb4Q91XZ6 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb4Q91XZ6 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb4Q91XZ6 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
Pcdhb4Q91XZ6 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb4Q91XZ6 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.77□□□□□ -0.05
Pcdhb4Q91XZ6 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
Pcdhb4Q91XZ6 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb4Q91XZ6 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb4Q91XZ6 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb4Q91XZ6 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb4Q91XZ6 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb4Q91XZ6 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb4Q91XZ6 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Pcdhb4Q91XZ6 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb4Q91XZ6 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Pcdhb4Q91XZ6 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb4Q91XZ6 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb4Q91XZ6 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb4Q91XZ6 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.76□□□□□ -0.05
Pcdhb4Q91XZ6 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
Pcdhb4Q91XZ6 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14.76□□□□□ -0.05
Pcdhb4Q91XZ6 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.76□□□□□ -0.05
Pcdhb4Q91XZ6 Gm17971-201ENSMUST00000190239 806 ntBASIC14.76□□□□□ -0.05
Pcdhb4Q91XZ6 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.76□□□□□ -0.05
Pcdhb4Q91XZ6 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.76□□□□□ -0.05
Pcdhb4Q91XZ6 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Pcdhb4Q91XZ6 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb4Q91XZ6 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb4Q91XZ6 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms