Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb6Q91XZ4 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb6Q91XZ4 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb6Q91XZ4 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb6Q91XZ4 Gm43509-201ENSMUST00000196551 2594 ntBASIC15.25■□□□□ 0.03
Pcdhb6Q91XZ4 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb6Q91XZ4 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb6Q91XZ4 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb6Q91XZ4 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
Pcdhb6Q91XZ4 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb6Q91XZ4 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb6Q91XZ4 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb6Q91XZ4 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC15.24■□□□□ 0.03
Pcdhb6Q91XZ4 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb6Q91XZ4 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC15.24■□□□□ 0.03
Pcdhb6Q91XZ4 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC15.24■□□□□ 0.03
Pcdhb6Q91XZ4 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Pcdhb6Q91XZ4 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC15.24■□□□□ 0.03
Pcdhb6Q91XZ4 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb6Q91XZ4 AC154572.2-201ENSMUST00000225105 997 ntBASIC15.24■□□□□ 0.03
Pcdhb6Q91XZ4 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb6Q91XZ4 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb6Q91XZ4 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb6Q91XZ4 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC15.24■□□□□ 0.03
Pcdhb6Q91XZ4 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb6Q91XZ4 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb6Q91XZ4 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb6Q91XZ4 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC15.24■□□□□ 0.03
Pcdhb6Q91XZ4 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Pcdhb6Q91XZ4 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb6Q91XZ4 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb6Q91XZ4 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
Pcdhb6Q91XZ4 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Pcdhb6Q91XZ4 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Pcdhb6Q91XZ4 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Pcdhb6Q91XZ4 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.23■□□□□ 0.03
Pcdhb6Q91XZ4 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.23■□□□□ 0.03
Pcdhb6Q91XZ4 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb6Q91XZ4 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb6Q91XZ4 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Pcdhb6Q91XZ4 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb6Q91XZ4 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb6Q91XZ4 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.23■□□□□ 0.03
Pcdhb6Q91XZ4 Gm9385-201ENSMUST00000117563 472 ntBASIC15.23■□□□□ 0.03
Pcdhb6Q91XZ4 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Pcdhb6Q91XZ4 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Pcdhb6Q91XZ4 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb6Q91XZ4 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb6Q91XZ4 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb6Q91XZ4 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb6Q91XZ4 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb6Q91XZ4 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb6Q91XZ4 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb6Q91XZ4 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Pcdhb6Q91XZ4 Gm12620-201ENSMUST00000119791 1986 ntBASIC15.23■□□□□ 0.03
Pcdhb6Q91XZ4 Gm12612-201ENSMUST00000140182 1986 ntBASIC15.23■□□□□ 0.03
Pcdhb6Q91XZ4 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Pcdhb6Q91XZ4 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb6Q91XZ4 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb6Q91XZ4 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb6Q91XZ4 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb6Q91XZ4 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb6Q91XZ4 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb6Q91XZ4 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb6Q91XZ4 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb6Q91XZ4 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb6Q91XZ4 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb6Q91XZ4 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb6Q91XZ4 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb6Q91XZ4 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb6Q91XZ4 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC15.22■□□□□ 0.03
Pcdhb6Q91XZ4 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb6Q91XZ4 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb6Q91XZ4 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb6Q91XZ4 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb6Q91XZ4 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb6Q91XZ4 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb6Q91XZ4 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC15.22■□□□□ 0.03
Pcdhb6Q91XZ4 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb6Q91XZ4 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC15.22■□□□□ 0.03
Pcdhb6Q91XZ4 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Pcdhb6Q91XZ4 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb6Q91XZ4 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb6Q91XZ4 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC15.22■□□□□ 0.03
Pcdhb6Q91XZ4 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC15.22■□□□□ 0.03
Pcdhb6Q91XZ4 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC15.22■□□□□ 0.03
Pcdhb6Q91XZ4 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb6Q91XZ4 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb6Q91XZ4 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb6Q91XZ4 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb6Q91XZ4 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb6Q91XZ4 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
Pcdhb6Q91XZ4 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb6Q91XZ4 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb6Q91XZ4 Gm45133-201ENSMUST00000207548 2773 ntBASIC15.22■□□□□ 0.03
Pcdhb6Q91XZ4 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb6Q91XZ4 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb6Q91XZ4 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb6Q91XZ4 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb6Q91XZ4 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms