Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TraipQ8VIG6 Gm14767-201ENSMUST00000121559 586 ntBASIC15.77■□□□□ 0.12
TraipQ8VIG6 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TraipQ8VIG6 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC15.77■□□□□ 0.12
TraipQ8VIG6 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TraipQ8VIG6 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TraipQ8VIG6 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TraipQ8VIG6 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.77■□□□□ 0.11
TraipQ8VIG6 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TraipQ8VIG6 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TraipQ8VIG6 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.77■□□□□ 0.11
TraipQ8VIG6 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.11
TraipQ8VIG6 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TraipQ8VIG6 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
TraipQ8VIG6 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TraipQ8VIG6 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TraipQ8VIG6 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
TraipQ8VIG6 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TraipQ8VIG6 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
TraipQ8VIG6 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TraipQ8VIG6 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.76■□□□□ 0.11
TraipQ8VIG6 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.76■□□□□ 0.11
TraipQ8VIG6 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
TraipQ8VIG6 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC15.76■□□□□ 0.11
TraipQ8VIG6 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC15.76■□□□□ 0.11
TraipQ8VIG6 Gm8410-201ENSMUST00000117225 605 ntBASIC15.76■□□□□ 0.11
TraipQ8VIG6 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TraipQ8VIG6 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TraipQ8VIG6 Gm9719-201ENSMUST00000162765 543 ntBASIC15.76■□□□□ 0.11
TraipQ8VIG6 Gm27533-201ENSMUST00000183800 152 ntBASIC15.76■□□□□ 0.11
TraipQ8VIG6 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TraipQ8VIG6 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TraipQ8VIG6 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC15.76■□□□□ 0.11
TraipQ8VIG6 Rbfox2-208ENSMUST00000227930 1218 ntBASIC15.76■□□□□ 0.11
TraipQ8VIG6 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC15.76■□□□□ 0.11
TraipQ8VIG6 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
TraipQ8VIG6 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TraipQ8VIG6 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
TraipQ8VIG6 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TraipQ8VIG6 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TraipQ8VIG6 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
TraipQ8VIG6 Asic1-205ENSMUST00000228185 1818 ntBASIC15.75■□□□□ 0.11
TraipQ8VIG6 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.75■□□□□ 0.11
TraipQ8VIG6 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TraipQ8VIG6 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TraipQ8VIG6 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
TraipQ8VIG6 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TraipQ8VIG6 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TraipQ8VIG6 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TraipQ8VIG6 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.75■□□□□ 0.11
TraipQ8VIG6 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TraipQ8VIG6 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TraipQ8VIG6 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
TraipQ8VIG6 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC15.75■□□□□ 0.11
TraipQ8VIG6 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TraipQ8VIG6 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TraipQ8VIG6 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TraipQ8VIG6 Mir7684-201ENSMUST00000183858 60 ntBASIC15.75■□□□□ 0.11
TraipQ8VIG6 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC15.75■□□□□ 0.11
TraipQ8VIG6 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TraipQ8VIG6 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TraipQ8VIG6 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TraipQ8VIG6 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TraipQ8VIG6 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TraipQ8VIG6 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TraipQ8VIG6 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TraipQ8VIG6 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TraipQ8VIG6 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
TraipQ8VIG6 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TraipQ8VIG6 Gm6756-201ENSMUST00000180647 1620 ntBASIC15.75■□□□□ 0.11
TraipQ8VIG6 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TraipQ8VIG6 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TraipQ8VIG6 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TraipQ8VIG6 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TraipQ8VIG6 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TraipQ8VIG6 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TraipQ8VIG6 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.74■□□□□ 0.11
TraipQ8VIG6 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC15.74■□□□□ 0.11
TraipQ8VIG6 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TraipQ8VIG6 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC15.74■□□□□ 0.11
TraipQ8VIG6 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TraipQ8VIG6 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TraipQ8VIG6 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TraipQ8VIG6 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TraipQ8VIG6 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TraipQ8VIG6 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TraipQ8VIG6 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TraipQ8VIG6 Mir8102-201ENSMUST00000184148 139 ntBASIC15.74■□□□□ 0.11
TraipQ8VIG6 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC15.74■□□□□ 0.11
TraipQ8VIG6 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TraipQ8VIG6 Gm2594-201ENSMUST00000214774 742 ntBASIC15.74■□□□□ 0.11
TraipQ8VIG6 Gm6888-201ENSMUST00000221983 706 ntBASIC15.74■□□□□ 0.11
TraipQ8VIG6 Wdyhv1-203ENSMUST00000226889 394 ntBASIC15.74■□□□□ 0.11
TraipQ8VIG6 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TraipQ8VIG6 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.74■□□□□ 0.11
TraipQ8VIG6 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TraipQ8VIG6 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TraipQ8VIG6 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TraipQ8VIG6 Tcf21-202ENSMUST00000218002 1788 ntBASIC15.74■□□□□ 0.11
TraipQ8VIG6 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms