Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf8Q8VC56 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf8Q8VC56 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Rnf8Q8VC56 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Rnf8Q8VC56 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf8Q8VC56 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf8Q8VC56 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf8Q8VC56 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf8Q8VC56 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.34□□□□□ -0.11
Rnf8Q8VC56 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.34□□□□□ -0.11
Rnf8Q8VC56 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.34□□□□□ -0.11
Rnf8Q8VC56 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf8Q8VC56 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Rnf8Q8VC56 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf8Q8VC56 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf8Q8VC56 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf8Q8VC56 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf8Q8VC56 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf8Q8VC56 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
Rnf8Q8VC56 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf8Q8VC56 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf8Q8VC56 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.34□□□□□ -0.11
Rnf8Q8VC56 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Rnf8Q8VC56 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf8Q8VC56 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.34□□□□□ -0.11
Rnf8Q8VC56 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf8Q8VC56 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Rnf8Q8VC56 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf8Q8VC56 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Rnf8Q8VC56 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf8Q8VC56 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Rnf8Q8VC56 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf8Q8VC56 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Rnf8Q8VC56 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf8Q8VC56 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
Rnf8Q8VC56 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf8Q8VC56 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf8Q8VC56 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf8Q8VC56 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf8Q8VC56 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rnf8Q8VC56 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Rnf8Q8VC56 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rnf8Q8VC56 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rnf8Q8VC56 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rnf8Q8VC56 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rnf8Q8VC56 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.33□□□□□ -0.11
Rnf8Q8VC56 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf8Q8VC56 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf8Q8VC56 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.33□□□□□ -0.12
Rnf8Q8VC56 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf8Q8VC56 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Rnf8Q8VC56 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf8Q8VC56 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf8Q8VC56 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf8Q8VC56 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf8Q8VC56 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Rnf8Q8VC56 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.33□□□□□ -0.12
Rnf8Q8VC56 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf8Q8VC56 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.33□□□□□ -0.12
Rnf8Q8VC56 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.33□□□□□ -0.12
Rnf8Q8VC56 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf8Q8VC56 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Rnf8Q8VC56 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Rnf8Q8VC56 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf8Q8VC56 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf8Q8VC56 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf8Q8VC56 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Rnf8Q8VC56 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf8Q8VC56 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Rnf8Q8VC56 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Rnf8Q8VC56 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.33□□□□□ -0.12
Rnf8Q8VC56 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf8Q8VC56 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf8Q8VC56 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf8Q8VC56 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.33□□□□□ -0.12
Rnf8Q8VC56 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf8Q8VC56 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf8Q8VC56 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.33□□□□□ -0.12
Rnf8Q8VC56 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf8Q8VC56 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Rnf8Q8VC56 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf8Q8VC56 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Rnf8Q8VC56 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Rnf8Q8VC56 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf8Q8VC56 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf8Q8VC56 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf8Q8VC56 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf8Q8VC56 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf8Q8VC56 Gm11764-201ENSMUST00000120221 623 ntBASIC14.32□□□□□ -0.12
Rnf8Q8VC56 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.32□□□□□ -0.12
Rnf8Q8VC56 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Rnf8Q8VC56 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.32□□□□□ -0.12
Rnf8Q8VC56 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf8Q8VC56 Gm27646-201ENSMUST00000183989 110 ntBASIC14.32□□□□□ -0.12
Rnf8Q8VC56 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.32□□□□□ -0.12
Rnf8Q8VC56 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.32□□□□□ -0.12
Rnf8Q8VC56 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
Rnf8Q8VC56 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.32□□□□□ -0.12
Rnf8Q8VC56 AV026068-213ENSMUST00000223675 1171 ntBASIC14.32□□□□□ -0.12
Rnf8Q8VC56 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms