Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpap2Q8VC34 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rpap2Q8VC34 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpap2Q8VC34 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpap2Q8VC34 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpap2Q8VC34 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpap2Q8VC34 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpap2Q8VC34 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpap2Q8VC34 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rpap2Q8VC34 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rpap2Q8VC34 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rpap2Q8VC34 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rpap2Q8VC34 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC16.28■□□□□ 0.2
Rpap2Q8VC34 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Rpap2Q8VC34 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Rpap2Q8VC34 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpap2Q8VC34 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpap2Q8VC34 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rpap2Q8VC34 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Rpap2Q8VC34 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpap2Q8VC34 Rpph1-201ENSMUST00000175096 319 ntBASIC16.28■□□□□ 0.2
Rpap2Q8VC34 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC16.28■□□□□ 0.2
Rpap2Q8VC34 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpap2Q8VC34 Gm5712-201ENSMUST00000199748 1043 ntBASIC16.28■□□□□ 0.2
Rpap2Q8VC34 Gm43332-201ENSMUST00000202511 1044 ntBASIC16.28■□□□□ 0.2
Rpap2Q8VC34 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC16.28■□□□□ 0.2
Rpap2Q8VC34 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpap2Q8VC34 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpap2Q8VC34 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpap2Q8VC34 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Rpap2Q8VC34 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpap2Q8VC34 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rpap2Q8VC34 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpap2Q8VC34 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Rpap2Q8VC34 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC16.28■□□□□ 0.2
Rpap2Q8VC34 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.28■□□□□ 0.2
Rpap2Q8VC34 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpap2Q8VC34 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpap2Q8VC34 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Rpap2Q8VC34 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpap2Q8VC34 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpap2Q8VC34 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Rpap2Q8VC34 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Rpap2Q8VC34 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpap2Q8VC34 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rpap2Q8VC34 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rpap2Q8VC34 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rpap2Q8VC34 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rpap2Q8VC34 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Rpap2Q8VC34 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rpap2Q8VC34 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rpap2Q8VC34 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rpap2Q8VC34 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rpap2Q8VC34 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Rpap2Q8VC34 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Rpap2Q8VC34 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rpap2Q8VC34 Gm17271-201ENSMUST00000165535 355 ntBASIC16.27■□□□□ 0.2
Rpap2Q8VC34 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC16.27■□□□□ 0.2
Rpap2Q8VC34 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC16.27■□□□□ 0.2
Rpap2Q8VC34 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC16.27■□□□□ 0.2
Rpap2Q8VC34 CT025555.1-201ENSMUST00000225901 1217 ntBASIC16.27■□□□□ 0.2
Rpap2Q8VC34 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rpap2Q8VC34 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rpap2Q8VC34 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Rpap2Q8VC34 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Rpap2Q8VC34 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.2
Rpap2Q8VC34 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rpap2Q8VC34 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.27■□□□□ 0.19
Rpap2Q8VC34 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rpap2Q8VC34 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Rpap2Q8VC34 Gm13233-201ENSMUST00000118760 1443 ntBASIC16.27■□□□□ 0.19
Rpap2Q8VC34 Gm13244-201ENSMUST00000118855 1446 ntBASIC16.27■□□□□ 0.19
Rpap2Q8VC34 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Rpap2Q8VC34 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Rpap2Q8VC34 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC16.27■□□□□ 0.19
Rpap2Q8VC34 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rpap2Q8VC34 Carlr-201ENSMUST00000181515 2574 ntBASIC16.27■□□□□ 0.19
Rpap2Q8VC34 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rpap2Q8VC34 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.27■□□□□ 0.19
Rpap2Q8VC34 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rpap2Q8VC34 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rpap2Q8VC34 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rpap2Q8VC34 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rpap2Q8VC34 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Rpap2Q8VC34 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rpap2Q8VC34 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Rpap2Q8VC34 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rpap2Q8VC34 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Rpap2Q8VC34 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC16.26■□□□□ 0.19
Rpap2Q8VC34 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC16.26■□□□□ 0.19
Rpap2Q8VC34 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Rpap2Q8VC34 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rpap2Q8VC34 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC16.26■□□□□ 0.19
Rpap2Q8VC34 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rpap2Q8VC34 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC16.26■□□□□ 0.19
Rpap2Q8VC34 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rpap2Q8VC34 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rpap2Q8VC34 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Rpap2Q8VC34 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rpap2Q8VC34 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms