Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc9Q8VC31 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc9Q8VC31 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc9Q8VC31 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc9Q8VC31 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.9■□□□□ 0.46
Ccdc9Q8VC31 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc9Q8VC31 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc9Q8VC31 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Ccdc9Q8VC31 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc9Q8VC31 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc9Q8VC31 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc9Q8VC31 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc9Q8VC31 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Ccdc9Q8VC31 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.89■□□□□ 0.45
Ccdc9Q8VC31 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Ccdc9Q8VC31 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc9Q8VC31 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Ccdc9Q8VC31 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc9Q8VC31 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
Ccdc9Q8VC31 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc9Q8VC31 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc9Q8VC31 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc9Q8VC31 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
Ccdc9Q8VC31 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.89■□□□□ 0.45
Ccdc9Q8VC31 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc9Q8VC31 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc9Q8VC31 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.89■□□□□ 0.45
Ccdc9Q8VC31 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc9Q8VC31 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc9Q8VC31 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc9Q8VC31 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc9Q8VC31 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc9Q8VC31 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Ccdc9Q8VC31 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Ccdc9Q8VC31 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc9Q8VC31 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc9Q8VC31 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc9Q8VC31 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc9Q8VC31 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Ccdc9Q8VC31 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc9Q8VC31 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
Ccdc9Q8VC31 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Ccdc9Q8VC31 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Ccdc9Q8VC31 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc9Q8VC31 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc9Q8VC31 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC17.89■□□□□ 0.45
Ccdc9Q8VC31 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc9Q8VC31 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.88■□□□□ 0.45
Ccdc9Q8VC31 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc9Q8VC31 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC17.88■□□□□ 0.45
Ccdc9Q8VC31 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc9Q8VC31 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc9Q8VC31 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
Ccdc9Q8VC31 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc9Q8VC31 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc9Q8VC31 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc9Q8VC31 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Ccdc9Q8VC31 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc9Q8VC31 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc9Q8VC31 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Ccdc9Q8VC31 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc9Q8VC31 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc9Q8VC31 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc9Q8VC31 Pcgf5-211ENSMUST00000225920 6443 ntBASIC17.88■□□□□ 0.45
Ccdc9Q8VC31 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC17.88■□□□□ 0.45
Ccdc9Q8VC31 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.88■□□□□ 0.45
Ccdc9Q8VC31 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc9Q8VC31 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Ccdc9Q8VC31 Actl10-202ENSMUST00000226583 1501 ntBASIC17.88■□□□□ 0.45
Ccdc9Q8VC31 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
Ccdc9Q8VC31 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc9Q8VC31 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc9Q8VC31 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc9Q8VC31 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc9Q8VC31 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc9Q8VC31 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc9Q8VC31 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc9Q8VC31 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.87■□□□□ 0.45
Ccdc9Q8VC31 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.87■□□□□ 0.45
Ccdc9Q8VC31 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc9Q8VC31 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc9Q8VC31 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc9Q8VC31 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc9Q8VC31 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc9Q8VC31 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc9Q8VC31 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Ccdc9Q8VC31 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.87■□□□□ 0.45
Ccdc9Q8VC31 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc9Q8VC31 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Ccdc9Q8VC31 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc9Q8VC31 Carlr-201ENSMUST00000181515 2574 ntBASIC17.86■□□□□ 0.45
Ccdc9Q8VC31 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc9Q8VC31 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc9Q8VC31 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc9Q8VC31 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC17.86■□□□□ 0.45
Ccdc9Q8VC31 AC164702.1-201ENSMUST00000220135 2212 ntBASIC17.86■□□□□ 0.45
Ccdc9Q8VC31 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Ccdc9Q8VC31 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc9Q8VC31 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.86■□□□□ 0.45
Ccdc9Q8VC31 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms