Protein–RNA interactions for Protein: Q8R480

Nup85, Nuclear pore complex protein Nup85, mousemouse

Known RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup85Q8R480 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nup85Q8R480 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Nup85Q8R480 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nup85Q8R480 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nup85Q8R480 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nup85Q8R480 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC15.27■□□□□ 0.04
Nup85Q8R480 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nup85Q8R480 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nup85Q8R480 Gm4913-201ENSMUST00000117075 1290 ntBASIC15.27■□□□□ 0.04
Nup85Q8R480 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC15.27■□□□□ 0.04
Nup85Q8R480 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nup85Q8R480 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Nup85Q8R480 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nup85Q8R480 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Nup85Q8R480 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nup85Q8R480 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nup85Q8R480 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
Nup85Q8R480 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nup85Q8R480 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nup85Q8R480 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nup85Q8R480 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Nup85Q8R480 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Nup85Q8R480 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nup85Q8R480 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC15.27■□□□□ 0.03
Nup85Q8R480 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nup85Q8R480 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nup85Q8R480 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nup85Q8R480 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nup85Q8R480 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nup85Q8R480 Efs-202ENSMUST00000227037 2540 ntBASIC15.26■□□□□ 0.03
Nup85Q8R480 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nup85Q8R480 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nup85Q8R480 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.26■□□□□ 0.03
Nup85Q8R480 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nup85Q8R480 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nup85Q8R480 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nup85Q8R480 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nup85Q8R480 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nup85Q8R480 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Nup85Q8R480 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nup85Q8R480 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nup85Q8R480 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Nup85Q8R480 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nup85Q8R480 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.26■□□□□ 0.03
Nup85Q8R480 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nup85Q8R480 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nup85Q8R480 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nup85Q8R480 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Nup85Q8R480 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nup85Q8R480 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Nup85Q8R480 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.26■□□□□ 0.03
Nup85Q8R480 Gm30437-201ENSMUST00000206086 1201 ntBASIC15.26■□□□□ 0.03
Nup85Q8R480 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.26■□□□□ 0.03
Nup85Q8R480 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nup85Q8R480 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Nup85Q8R480 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nup85Q8R480 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nup85Q8R480 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Nup85Q8R480 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nup85Q8R480 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nup85Q8R480 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nup85Q8R480 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.26■□□□□ 0.03
Nup85Q8R480 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nup85Q8R480 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nup85Q8R480 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nup85Q8R480 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nup85Q8R480 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nup85Q8R480 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nup85Q8R480 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nup85Q8R480 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nup85Q8R480 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nup85Q8R480 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.25■□□□□ 0.03
Nup85Q8R480 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nup85Q8R480 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nup85Q8R480 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Nup85Q8R480 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Nup85Q8R480 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Nup85Q8R480 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Nup85Q8R480 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC15.25■□□□□ 0.03
Nup85Q8R480 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nup85Q8R480 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nup85Q8R480 Gm17271-201ENSMUST00000165535 355 ntBASIC15.25■□□□□ 0.03
Nup85Q8R480 Gm18246-201ENSMUST00000221023 728 ntBASIC15.25■□□□□ 0.03
Nup85Q8R480 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nup85Q8R480 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nup85Q8R480 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nup85Q8R480 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nup85Q8R480 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC15.25■□□□□ 0.03
Nup85Q8R480 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nup85Q8R480 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nup85Q8R480 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nup85Q8R480 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC15.25■□□□□ 0.03
Nup85Q8R480 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nup85Q8R480 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Nup85Q8R480 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nup85Q8R480 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nup85Q8R480 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nup85Q8R480 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Nup85Q8R480 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nup85Q8R480 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms