Protein–RNA interactions for Protein: Q8R326

Pspc1, Paraspeckle component 1, mousemouse

Known RBP Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pspc1Q8R326 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pspc1Q8R326 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pspc1Q8R326 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pspc1Q8R326 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pspc1Q8R326 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pspc1Q8R326 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pspc1Q8R326 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pspc1Q8R326 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC17.06■□□□□ 0.32
Pspc1Q8R326 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pspc1Q8R326 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Pspc1Q8R326 Gm27622-201ENSMUST00000183779 60 ntBASIC17.06■□□□□ 0.32
Pspc1Q8R326 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC17.06■□□□□ 0.32
Pspc1Q8R326 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC17.06■□□□□ 0.32
Pspc1Q8R326 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pspc1Q8R326 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pspc1Q8R326 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pspc1Q8R326 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC17.06■□□□□ 0.32
Pspc1Q8R326 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC17.06■□□□□ 0.32
Pspc1Q8R326 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pspc1Q8R326 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pspc1Q8R326 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pspc1Q8R326 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
Pspc1Q8R326 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pspc1Q8R326 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pspc1Q8R326 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pspc1Q8R326 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pspc1Q8R326 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pspc1Q8R326 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pspc1Q8R326 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Pspc1Q8R326 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Pspc1Q8R326 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pspc1Q8R326 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pspc1Q8R326 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pspc1Q8R326 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pspc1Q8R326 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pspc1Q8R326 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pspc1Q8R326 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pspc1Q8R326 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pspc1Q8R326 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Pspc1Q8R326 Gm6415-201ENSMUST00000118488 348 ntBASIC17.05■□□□□ 0.32
Pspc1Q8R326 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pspc1Q8R326 Gm30437-201ENSMUST00000206086 1201 ntBASIC17.05■□□□□ 0.32
Pspc1Q8R326 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pspc1Q8R326 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Pspc1Q8R326 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pspc1Q8R326 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pspc1Q8R326 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pspc1Q8R326 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Pspc1Q8R326 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pspc1Q8R326 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pspc1Q8R326 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pspc1Q8R326 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC17.05■□□□□ 0.32
Pspc1Q8R326 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pspc1Q8R326 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pspc1Q8R326 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC17.05■□□□□ 0.32
Pspc1Q8R326 Gm13517-201ENSMUST00000120782 1495 ntBASIC17.05■□□□□ 0.32
Pspc1Q8R326 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Pspc1Q8R326 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pspc1Q8R326 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pspc1Q8R326 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Pspc1Q8R326 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pspc1Q8R326 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pspc1Q8R326 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pspc1Q8R326 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pspc1Q8R326 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pspc1Q8R326 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Pspc1Q8R326 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pspc1Q8R326 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Pspc1Q8R326 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pspc1Q8R326 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pspc1Q8R326 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pspc1Q8R326 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pspc1Q8R326 AC159621.2-201ENSMUST00000223519 1326 ntBASIC17.04■□□□□ 0.32
Pspc1Q8R326 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pspc1Q8R326 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Pspc1Q8R326 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC17.04■□□□□ 0.32
Pspc1Q8R326 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC17.04■□□□□ 0.32
Pspc1Q8R326 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC17.04■□□□□ 0.32
Pspc1Q8R326 Gm37277-201ENSMUST00000194052 1111 ntBASIC17.04■□□□□ 0.32
Pspc1Q8R326 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pspc1Q8R326 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pspc1Q8R326 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pspc1Q8R326 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pspc1Q8R326 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Pspc1Q8R326 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Pspc1Q8R326 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pspc1Q8R326 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pspc1Q8R326 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pspc1Q8R326 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pspc1Q8R326 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pspc1Q8R326 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pspc1Q8R326 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pspc1Q8R326 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pspc1Q8R326 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pspc1Q8R326 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pspc1Q8R326 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pspc1Q8R326 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pspc1Q8R326 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pspc1Q8R326 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pspc1Q8R326 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms