Protein–RNA interactions for Protein: Q8R2I0

Foxe1, Forkhead box protein E1, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxe1Q8R2I0 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Foxe1Q8R2I0 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Foxe1Q8R2I0 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Foxe1Q8R2I0 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Foxe1Q8R2I0 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Foxe1Q8R2I0 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Foxe1Q8R2I0 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Foxe1Q8R2I0 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Foxe1Q8R2I0 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Foxe1Q8R2I0 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Foxe1Q8R2I0 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Foxe1Q8R2I0 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Foxe1Q8R2I0 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Foxe1Q8R2I0 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Foxe1Q8R2I0 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.27■□□□□ 0.04
Foxe1Q8R2I0 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Foxe1Q8R2I0 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Foxe1Q8R2I0 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC15.27■□□□□ 0.04
Foxe1Q8R2I0 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.27■□□□□ 0.04
Foxe1Q8R2I0 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC15.27■□□□□ 0.04
Foxe1Q8R2I0 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Foxe1Q8R2I0 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Foxe1Q8R2I0 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Foxe1Q8R2I0 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.27■□□□□ 0.04
Foxe1Q8R2I0 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Foxe1Q8R2I0 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Foxe1Q8R2I0 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC15.27■□□□□ 0.04
Foxe1Q8R2I0 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
Foxe1Q8R2I0 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Foxe1Q8R2I0 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Foxe1Q8R2I0 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Foxe1Q8R2I0 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC15.27■□□□□ 0.04
Foxe1Q8R2I0 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Foxe1Q8R2I0 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Foxe1Q8R2I0 AC162801.1-201ENSMUST00000220612 198 ntBASIC15.27■□□□□ 0.04
Foxe1Q8R2I0 AC154171.1-201ENSMUST00000224610 643 ntBASIC15.27■□□□□ 0.04
Foxe1Q8R2I0 AC238811.3-201ENSMUST00000225422 709 ntBASIC15.27■□□□□ 0.04
Foxe1Q8R2I0 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Foxe1Q8R2I0 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Foxe1Q8R2I0 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Foxe1Q8R2I0 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Foxe1Q8R2I0 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Foxe1Q8R2I0 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Foxe1Q8R2I0 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.27■□□□□ 0.03
Foxe1Q8R2I0 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Foxe1Q8R2I0 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Foxe1Q8R2I0 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Foxe1Q8R2I0 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.03
Foxe1Q8R2I0 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Foxe1Q8R2I0 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Foxe1Q8R2I0 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Foxe1Q8R2I0 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Foxe1Q8R2I0 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Foxe1Q8R2I0 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Foxe1Q8R2I0 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Foxe1Q8R2I0 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Foxe1Q8R2I0 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Foxe1Q8R2I0 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Foxe1Q8R2I0 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Foxe1Q8R2I0 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Foxe1Q8R2I0 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Foxe1Q8R2I0 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Foxe1Q8R2I0 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Foxe1Q8R2I0 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Foxe1Q8R2I0 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.26■□□□□ 0.03
Foxe1Q8R2I0 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Foxe1Q8R2I0 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Foxe1Q8R2I0 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Foxe1Q8R2I0 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Foxe1Q8R2I0 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC15.26■□□□□ 0.03
Foxe1Q8R2I0 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Foxe1Q8R2I0 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Foxe1Q8R2I0 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.26■□□□□ 0.03
Foxe1Q8R2I0 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Foxe1Q8R2I0 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Foxe1Q8R2I0 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Foxe1Q8R2I0 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Foxe1Q8R2I0 Mir1247-201ENSMUST00000116706 82 ntBASIC15.26■□□□□ 0.03
Foxe1Q8R2I0 Gm7820-201ENSMUST00000121012 1052 ntBASIC15.26■□□□□ 0.03
Foxe1Q8R2I0 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC15.26■□□□□ 0.03
Foxe1Q8R2I0 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
Foxe1Q8R2I0 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Foxe1Q8R2I0 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC15.26■□□□□ 0.03
Foxe1Q8R2I0 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC15.26■□□□□ 0.03
Foxe1Q8R2I0 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Foxe1Q8R2I0 Gm44799-201ENSMUST00000207639 1202 ntBASIC15.26■□□□□ 0.03
Foxe1Q8R2I0 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC15.26■□□□□ 0.03
Foxe1Q8R2I0 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.26■□□□□ 0.03
Foxe1Q8R2I0 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Foxe1Q8R2I0 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Foxe1Q8R2I0 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Foxe1Q8R2I0 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Foxe1Q8R2I0 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Foxe1Q8R2I0 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Foxe1Q8R2I0 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.26■□□□□ 0.03
Foxe1Q8R2I0 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Foxe1Q8R2I0 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Foxe1Q8R2I0 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.26■□□□□ 0.03
Foxe1Q8R2I0 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Foxe1Q8R2I0 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms