Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Gm21899-201ENSMUST00000190745 696 ntBASIC18.93■□□□□ 0.62
Chmp7Q8R1T1 Gm21910-201ENSMUST00000191163 696 ntBASIC18.93■□□□□ 0.62
Chmp7Q8R1T1 Gm21849-201ENSMUST00000191571 696 ntBASIC18.93■□□□□ 0.62
Chmp7Q8R1T1 Gm28678-201ENSMUST00000191593 696 ntBASIC18.93■□□□□ 0.62
Chmp7Q8R1T1 Gm20910-201ENSMUST00000193268 696 ntBASIC18.93■□□□□ 0.62
Chmp7Q8R1T1 Gm21871-201ENSMUST00000194621 696 ntBASIC18.93■□□□□ 0.62
Chmp7Q8R1T1 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp7Q8R1T1 AC135669.1-201ENSMUST00000213585 412 ntBASIC18.93■□□□□ 0.62
Chmp7Q8R1T1 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp7Q8R1T1 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp7Q8R1T1 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp7Q8R1T1 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Chmp7Q8R1T1 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp7Q8R1T1 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp7Q8R1T1 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp7Q8R1T1 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp7Q8R1T1 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp7Q8R1T1 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp7Q8R1T1 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp7Q8R1T1 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp7Q8R1T1 Gm27528-202ENSMUST00000222916 2012 ntBASIC18.92■□□□□ 0.62
Chmp7Q8R1T1 Gm6222-201ENSMUST00000120787 396 ntBASIC18.92■□□□□ 0.62
Chmp7Q8R1T1 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp7Q8R1T1 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp7Q8R1T1 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp7Q8R1T1 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp7Q8R1T1 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp7Q8R1T1 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp7Q8R1T1 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp7Q8R1T1 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp7Q8R1T1 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp7Q8R1T1 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp7Q8R1T1 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp7Q8R1T1 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Chmp7Q8R1T1 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp7Q8R1T1 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp7Q8R1T1 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp7Q8R1T1 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp7Q8R1T1 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC18.91■□□□□ 0.62
Chmp7Q8R1T1 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC18.91■□□□□ 0.62
Chmp7Q8R1T1 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp7Q8R1T1 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp7Q8R1T1 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp7Q8R1T1 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp7Q8R1T1 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp7Q8R1T1 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Chmp7Q8R1T1 Gm42901-201ENSMUST00000197735 3171 ntBASIC18.91■□□□□ 0.62
Chmp7Q8R1T1 Trav13-3-201ENSMUST00000117226 336 ntBASIC18.91■□□□□ 0.62
Chmp7Q8R1T1 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp7Q8R1T1 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
Chmp7Q8R1T1 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC18.91■□□□□ 0.62
Chmp7Q8R1T1 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
Chmp7Q8R1T1 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC18.91■□□□□ 0.62
Chmp7Q8R1T1 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp7Q8R1T1 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Chmp7Q8R1T1 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp7Q8R1T1 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp7Q8R1T1 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC18.91■□□□□ 0.62
Chmp7Q8R1T1 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp7Q8R1T1 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp7Q8R1T1 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Chmp7Q8R1T1 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Chmp7Q8R1T1 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp7Q8R1T1 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp7Q8R1T1 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp7Q8R1T1 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC18.91■□□□□ 0.62
Chmp7Q8R1T1 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Chmp7Q8R1T1 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp7Q8R1T1 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp7Q8R1T1 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp7Q8R1T1 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp7Q8R1T1 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC18.9■□□□□ 0.62
Chmp7Q8R1T1 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp7Q8R1T1 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp7Q8R1T1 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp7Q8R1T1 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp7Q8R1T1 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp7Q8R1T1 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp7Q8R1T1 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC18.9■□□□□ 0.62
Chmp7Q8R1T1 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC18.9■□□□□ 0.62
Chmp7Q8R1T1 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC18.9■□□□□ 0.62
Chmp7Q8R1T1 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC18.9■□□□□ 0.62
Chmp7Q8R1T1 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC18.9■□□□□ 0.62
Chmp7Q8R1T1 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp7Q8R1T1 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp7Q8R1T1 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp7Q8R1T1 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp7Q8R1T1 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC18.9■□□□□ 0.62
Chmp7Q8R1T1 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Chmp7Q8R1T1 Gm46209-201ENSMUST00000217912 553 ntBASIC18.9■□□□□ 0.62
Chmp7Q8R1T1 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp7Q8R1T1 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp7Q8R1T1 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp7Q8R1T1 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp7Q8R1T1 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp7Q8R1T1 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp7Q8R1T1 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp7Q8R1T1 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC18.9■□□□□ 0.62
Chmp7Q8R1T1 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp7Q8R1T1 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms