Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vopp1Q8R1C3 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC15.6■□□□□ 0.09
Vopp1Q8R1C3 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vopp1Q8R1C3 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Vopp1Q8R1C3 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Vopp1Q8R1C3 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vopp1Q8R1C3 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vopp1Q8R1C3 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vopp1Q8R1C3 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Vopp1Q8R1C3 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vopp1Q8R1C3 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC15.6■□□□□ 0.09
Vopp1Q8R1C3 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Vopp1Q8R1C3 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vopp1Q8R1C3 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Vopp1Q8R1C3 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vopp1Q8R1C3 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vopp1Q8R1C3 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Vopp1Q8R1C3 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vopp1Q8R1C3 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vopp1Q8R1C3 Gm12859-201ENSMUST00000117834 427 ntBASIC15.59■□□□□ 0.09
Vopp1Q8R1C3 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vopp1Q8R1C3 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC15.59■□□□□ 0.09
Vopp1Q8R1C3 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vopp1Q8R1C3 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC15.59■□□□□ 0.09
Vopp1Q8R1C3 AA619741-201ENSMUST00000195095 646 ntBASIC15.59■□□□□ 0.09
Vopp1Q8R1C3 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Vopp1Q8R1C3 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC15.59■□□□□ 0.09
Vopp1Q8R1C3 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Vopp1Q8R1C3 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Vopp1Q8R1C3 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Vopp1Q8R1C3 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Vopp1Q8R1C3 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Vopp1Q8R1C3 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Vopp1Q8R1C3 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Vopp1Q8R1C3 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC15.58■□□□□ 0.09
Vopp1Q8R1C3 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vopp1Q8R1C3 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vopp1Q8R1C3 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC15.58■□□□□ 0.08
Vopp1Q8R1C3 AC121598.1-201ENSMUST00000228224 1019 ntBASIC15.58■□□□□ 0.08
Vopp1Q8R1C3 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vopp1Q8R1C3 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vopp1Q8R1C3 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vopp1Q8R1C3 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Vopp1Q8R1C3 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Vopp1Q8R1C3 Gm4081-201ENSMUST00000195287 1838 ntBASIC15.58■□□□□ 0.08
Vopp1Q8R1C3 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vopp1Q8R1C3 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Vopp1Q8R1C3 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC15.58■□□□□ 0.08
Vopp1Q8R1C3 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.58■□□□□ 0.08
Vopp1Q8R1C3 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.58■□□□□ 0.08
Vopp1Q8R1C3 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vopp1Q8R1C3 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Vopp1Q8R1C3 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vopp1Q8R1C3 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Vopp1Q8R1C3 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Vopp1Q8R1C3 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC15.57■□□□□ 0.08
Vopp1Q8R1C3 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Vopp1Q8R1C3 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Vopp1Q8R1C3 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vopp1Q8R1C3 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vopp1Q8R1C3 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vopp1Q8R1C3 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vopp1Q8R1C3 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Vopp1Q8R1C3 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Vopp1Q8R1C3 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC15.57■□□□□ 0.08
Vopp1Q8R1C3 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC15.57■□□□□ 0.08
Vopp1Q8R1C3 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC15.57■□□□□ 0.08
Vopp1Q8R1C3 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Vopp1Q8R1C3 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Vopp1Q8R1C3 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vopp1Q8R1C3 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Vopp1Q8R1C3 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vopp1Q8R1C3 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Vopp1Q8R1C3 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vopp1Q8R1C3 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vopp1Q8R1C3 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Vopp1Q8R1C3 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vopp1Q8R1C3 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC15.57■□□□□ 0.08
Vopp1Q8R1C3 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vopp1Q8R1C3 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vopp1Q8R1C3 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vopp1Q8R1C3 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.56■□□□□ 0.08
Vopp1Q8R1C3 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vopp1Q8R1C3 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC15.56■□□□□ 0.08
Vopp1Q8R1C3 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vopp1Q8R1C3 Gm11424-201ENSMUST00000121929 829 ntBASIC15.56■□□□□ 0.08
Vopp1Q8R1C3 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vopp1Q8R1C3 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Vopp1Q8R1C3 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC15.56■□□□□ 0.08
Vopp1Q8R1C3 Gm10766-202ENSMUST00000194123 606 ntBASIC15.56■□□□□ 0.08
Vopp1Q8R1C3 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC15.56■□□□□ 0.08
Vopp1Q8R1C3 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vopp1Q8R1C3 Gm20445-201ENSMUST00000061905 565 ntBASIC15.56■□□□□ 0.08
Vopp1Q8R1C3 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Vopp1Q8R1C3 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vopp1Q8R1C3 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Vopp1Q8R1C3 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Vopp1Q8R1C3 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vopp1Q8R1C3 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Vopp1Q8R1C3 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms