Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ddx54Q8K4L0 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ddx54Q8K4L0 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
Ddx54Q8K4L0 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ddx54Q8K4L0 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ddx54Q8K4L0 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC19.29■□□□□ 0.68
Ddx54Q8K4L0 Gm18307-201ENSMUST00000206864 949 ntBASIC19.29■□□□□ 0.68
Ddx54Q8K4L0 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ddx54Q8K4L0 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ddx54Q8K4L0 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Ddx54Q8K4L0 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ddx54Q8K4L0 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ddx54Q8K4L0 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ddx54Q8K4L0 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ddx54Q8K4L0 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ddx54Q8K4L0 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ddx54Q8K4L0 Gm45751-201ENSMUST00000210185 1573 ntBASIC19.28■□□□□ 0.68
Ddx54Q8K4L0 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Ddx54Q8K4L0 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ddx54Q8K4L0 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ddx54Q8K4L0 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ddx54Q8K4L0 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC19.28■□□□□ 0.68
Ddx54Q8K4L0 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC19.28■□□□□ 0.68
Ddx54Q8K4L0 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Ddx54Q8K4L0 Gm33320-201ENSMUST00000192232 530 ntBASIC19.28■□□□□ 0.68
Ddx54Q8K4L0 Gm38230-201ENSMUST00000193572 1159 ntBASIC19.28■□□□□ 0.68
Ddx54Q8K4L0 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC19.28■□□□□ 0.68
Ddx54Q8K4L0 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Ddx54Q8K4L0 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC19.28■□□□□ 0.68
Ddx54Q8K4L0 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ddx54Q8K4L0 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ddx54Q8K4L0 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ddx54Q8K4L0 Celf4-206ENSMUST00000224553 1729 ntBASIC19.28■□□□□ 0.68
Ddx54Q8K4L0 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ddx54Q8K4L0 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ddx54Q8K4L0 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC19.27■□□□□ 0.68
Ddx54Q8K4L0 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ddx54Q8K4L0 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ddx54Q8K4L0 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ddx54Q8K4L0 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ddx54Q8K4L0 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ddx54Q8K4L0 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ddx54Q8K4L0 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Ddx54Q8K4L0 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC19.27■□□□□ 0.68
Ddx54Q8K4L0 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC19.27■□□□□ 0.68
Ddx54Q8K4L0 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC19.27■□□□□ 0.68
Ddx54Q8K4L0 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ddx54Q8K4L0 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ddx54Q8K4L0 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.27■□□□□ 0.68
Ddx54Q8K4L0 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ddx54Q8K4L0 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ddx54Q8K4L0 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ddx54Q8K4L0 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC19.27■□□□□ 0.68
Ddx54Q8K4L0 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ddx54Q8K4L0 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ddx54Q8K4L0 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ddx54Q8K4L0 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Ddx54Q8K4L0 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ddx54Q8K4L0 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ddx54Q8K4L0 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC19.26■□□□□ 0.67
Ddx54Q8K4L0 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ddx54Q8K4L0 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ddx54Q8K4L0 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC19.26■□□□□ 0.67
Ddx54Q8K4L0 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ddx54Q8K4L0 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ddx54Q8K4L0 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ddx54Q8K4L0 Gm14660-201ENSMUST00000119809 575 ntBASIC19.26■□□□□ 0.67
Ddx54Q8K4L0 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC19.26■□□□□ 0.67
Ddx54Q8K4L0 Gm27486-201ENSMUST00000184923 80 ntBASIC19.26■□□□□ 0.67
Ddx54Q8K4L0 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ddx54Q8K4L0 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ddx54Q8K4L0 CT009713.10-202ENSMUST00000225734 696 ntBASIC19.26■□□□□ 0.67
Ddx54Q8K4L0 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ddx54Q8K4L0 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ddx54Q8K4L0 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC19.26■□□□□ 0.67
Ddx54Q8K4L0 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ddx54Q8K4L0 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ddx54Q8K4L0 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ddx54Q8K4L0 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC19.25■□□□□ 0.67
Ddx54Q8K4L0 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ddx54Q8K4L0 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC19.25■□□□□ 0.67
Ddx54Q8K4L0 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ddx54Q8K4L0 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ddx54Q8K4L0 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Ddx54Q8K4L0 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Ddx54Q8K4L0 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Ddx54Q8K4L0 Gm27731-201ENSMUST00000185192 107 ntBASIC19.25■□□□□ 0.67
Ddx54Q8K4L0 AC156560.2-201ENSMUST00000221232 264 ntBASIC19.25■□□□□ 0.67
Ddx54Q8K4L0 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC19.25■□□□□ 0.67
Ddx54Q8K4L0 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ddx54Q8K4L0 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ddx54Q8K4L0 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ddx54Q8K4L0 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC19.25■□□□□ 0.67
Ddx54Q8K4L0 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ddx54Q8K4L0 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC19.25■□□□□ 0.67
Ddx54Q8K4L0 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ddx54Q8K4L0 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ddx54Q8K4L0 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ddx54Q8K4L0 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ddx54Q8K4L0 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms