Protein–RNA interactions for Protein: Q8K3G5

Vrk3, Inactive serine/threonine-protein kinase VRK3, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk3Q8K3G5 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vrk3Q8K3G5 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vrk3Q8K3G5 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Vrk3Q8K3G5 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vrk3Q8K3G5 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vrk3Q8K3G5 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vrk3Q8K3G5 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vrk3Q8K3G5 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vrk3Q8K3G5 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Vrk3Q8K3G5 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Vrk3Q8K3G5 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vrk3Q8K3G5 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vrk3Q8K3G5 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vrk3Q8K3G5 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Vrk3Q8K3G5 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vrk3Q8K3G5 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vrk3Q8K3G5 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vrk3Q8K3G5 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vrk3Q8K3G5 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vrk3Q8K3G5 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vrk3Q8K3G5 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vrk3Q8K3G5 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
Vrk3Q8K3G5 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Vrk3Q8K3G5 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC12.61□□□□□ -0.39
Vrk3Q8K3G5 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
Vrk3Q8K3G5 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vrk3Q8K3G5 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC12.61□□□□□ -0.39
Vrk3Q8K3G5 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vrk3Q8K3G5 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vrk3Q8K3G5 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Vrk3Q8K3G5 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC12.61□□□□□ -0.39
Vrk3Q8K3G5 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vrk3Q8K3G5 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.61□□□□□ -0.39
Vrk3Q8K3G5 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vrk3Q8K3G5 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vrk3Q8K3G5 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vrk3Q8K3G5 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vrk3Q8K3G5 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vrk3Q8K3G5 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vrk3Q8K3G5 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vrk3Q8K3G5 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vrk3Q8K3G5 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vrk3Q8K3G5 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vrk3Q8K3G5 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vrk3Q8K3G5 Gm45293-201ENSMUST00000209754 1812 ntBASIC12.6□□□□□ -0.39
Vrk3Q8K3G5 AC157650.3-201ENSMUST00000225058 1476 ntBASIC12.6□□□□□ -0.39
Vrk3Q8K3G5 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vrk3Q8K3G5 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vrk3Q8K3G5 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vrk3Q8K3G5 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vrk3Q8K3G5 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vrk3Q8K3G5 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vrk3Q8K3G5 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vrk3Q8K3G5 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.6□□□□□ -0.39
Vrk3Q8K3G5 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vrk3Q8K3G5 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vrk3Q8K3G5 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vrk3Q8K3G5 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vrk3Q8K3G5 Gm25990-201ENSMUST00000102440 86 ntBASIC12.6□□□□□ -0.39
Vrk3Q8K3G5 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vrk3Q8K3G5 Gm15173-201ENSMUST00000122049 433 ntBASIC12.6□□□□□ -0.39
Vrk3Q8K3G5 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC12.6□□□□□ -0.39
Vrk3Q8K3G5 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vrk3Q8K3G5 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vrk3Q8K3G5 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC12.6□□□□□ -0.39
Vrk3Q8K3G5 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC12.6□□□□□ -0.39
Vrk3Q8K3G5 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC12.6□□□□□ -0.39
Vrk3Q8K3G5 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Vrk3Q8K3G5 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.6□□□□□ -0.39
Vrk3Q8K3G5 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vrk3Q8K3G5 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vrk3Q8K3G5 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Vrk3Q8K3G5 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Vrk3Q8K3G5 Gm37500-201ENSMUST00000192059 1443 ntBASIC12.6□□□□□ -0.39
Vrk3Q8K3G5 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vrk3Q8K3G5 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vrk3Q8K3G5 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Vrk3Q8K3G5 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
Vrk3Q8K3G5 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.6□□□□□ -0.39
Vrk3Q8K3G5 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.59□□□□□ -0.39
Vrk3Q8K3G5 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vrk3Q8K3G5 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Vrk3Q8K3G5 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vrk3Q8K3G5 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vrk3Q8K3G5 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vrk3Q8K3G5 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vrk3Q8K3G5 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vrk3Q8K3G5 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vrk3Q8K3G5 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vrk3Q8K3G5 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.59□□□□□ -0.39
Vrk3Q8K3G5 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vrk3Q8K3G5 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Vrk3Q8K3G5 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vrk3Q8K3G5 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vrk3Q8K3G5 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vrk3Q8K3G5 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vrk3Q8K3G5 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vrk3Q8K3G5 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.59□□□□□ -0.39
Vrk3Q8K3G5 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vrk3Q8K3G5 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms