Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim68Q8K243 Gm5184-201ENSMUST00000220417 1702 ntBASIC16.14■□□□□ 0.17
Trim68Q8K243 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim68Q8K243 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim68Q8K243 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trim68Q8K243 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim68Q8K243 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim68Q8K243 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.14■□□□□ 0.17
Trim68Q8K243 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim68Q8K243 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC16.14■□□□□ 0.17
Trim68Q8K243 Gm7336-201ENSMUST00000107041 1232 ntBASIC16.14■□□□□ 0.17
Trim68Q8K243 Gm12008-201ENSMUST00000117791 755 ntBASIC16.14■□□□□ 0.17
Trim68Q8K243 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim68Q8K243 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC16.14■□□□□ 0.17
Trim68Q8K243 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim68Q8K243 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim68Q8K243 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim68Q8K243 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim68Q8K243 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trim68Q8K243 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
Trim68Q8K243 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim68Q8K243 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim68Q8K243 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim68Q8K243 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Trim68Q8K243 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC16.14■□□□□ 0.17
Trim68Q8K243 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trim68Q8K243 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim68Q8K243 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim68Q8K243 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim68Q8K243 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim68Q8K243 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trim68Q8K243 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim68Q8K243 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trim68Q8K243 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trim68Q8K243 Gm37277-201ENSMUST00000194052 1111 ntBASIC16.13■□□□□ 0.17
Trim68Q8K243 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim68Q8K243 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim68Q8K243 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim68Q8K243 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim68Q8K243 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim68Q8K243 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim68Q8K243 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC16.13■□□□□ 0.17
Trim68Q8K243 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim68Q8K243 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim68Q8K243 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim68Q8K243 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim68Q8K243 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC16.13■□□□□ 0.17
Trim68Q8K243 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim68Q8K243 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim68Q8K243 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim68Q8K243 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim68Q8K243 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim68Q8K243 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Trim68Q8K243 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim68Q8K243 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trim68Q8K243 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim68Q8K243 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim68Q8K243 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim68Q8K243 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.12■□□□□ 0.17
Trim68Q8K243 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Trim68Q8K243 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC16.12■□□□□ 0.17
Trim68Q8K243 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC16.12■□□□□ 0.17
Trim68Q8K243 CT025555.1-201ENSMUST00000225901 1217 ntBASIC16.12■□□□□ 0.17
Trim68Q8K243 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Trim68Q8K243 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Trim68Q8K243 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim68Q8K243 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim68Q8K243 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim68Q8K243 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC16.12■□□□□ 0.17
Trim68Q8K243 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Trim68Q8K243 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim68Q8K243 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim68Q8K243 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim68Q8K243 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim68Q8K243 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim68Q8K243 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim68Q8K243 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim68Q8K243 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
Trim68Q8K243 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim68Q8K243 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trim68Q8K243 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim68Q8K243 Gm11453-201ENSMUST00000117318 1007 ntBASIC16.11■□□□□ 0.17
Trim68Q8K243 Gm13223-201ENSMUST00000118609 747 ntBASIC16.11■□□□□ 0.17
Trim68Q8K243 Gm12017-201ENSMUST00000122453 1003 ntBASIC16.11■□□□□ 0.17
Trim68Q8K243 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim68Q8K243 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC16.11■□□□□ 0.17
Trim68Q8K243 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trim68Q8K243 H2-Pa-201ENSMUST00000182803 626 ntBASIC16.11■□□□□ 0.17
Trim68Q8K243 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC16.11■□□□□ 0.17
Trim68Q8K243 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim68Q8K243 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim68Q8K243 Hist1h2al-201ENSMUST00000091708 339 ntBASIC16.11■□□□□ 0.17
Trim68Q8K243 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim68Q8K243 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim68Q8K243 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim68Q8K243 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Trim68Q8K243 Gm29340-201ENSMUST00000188763 3854 ntBASIC16.11■□□□□ 0.17
Trim68Q8K243 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Trim68Q8K243 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
Trim68Q8K243 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms