Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sox30Q8CGW4 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Sox30Q8CGW4 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Sox30Q8CGW4 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sox30Q8CGW4 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sox30Q8CGW4 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Sox30Q8CGW4 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sox30Q8CGW4 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Sox30Q8CGW4 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sox30Q8CGW4 Gm45630-201ENSMUST00000210243 1911 ntBASIC16.23■□□□□ 0.19
Sox30Q8CGW4 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC16.22■□□□□ 0.19
Sox30Q8CGW4 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sox30Q8CGW4 Gm13294-201ENSMUST00000121757 1330 ntBASIC16.22■□□□□ 0.19
Sox30Q8CGW4 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.22■□□□□ 0.19
Sox30Q8CGW4 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Sox30Q8CGW4 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sox30Q8CGW4 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Sox30Q8CGW4 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Sox30Q8CGW4 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Sox30Q8CGW4 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Sox30Q8CGW4 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sox30Q8CGW4 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.22■□□□□ 0.19
Sox30Q8CGW4 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.22■□□□□ 0.19
Sox30Q8CGW4 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sox30Q8CGW4 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sox30Q8CGW4 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sox30Q8CGW4 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
Sox30Q8CGW4 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sox30Q8CGW4 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sox30Q8CGW4 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sox30Q8CGW4 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.22■□□□□ 0.19
Sox30Q8CGW4 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sox30Q8CGW4 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Sox30Q8CGW4 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sox30Q8CGW4 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sox30Q8CGW4 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sox30Q8CGW4 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sox30Q8CGW4 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Sox30Q8CGW4 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
Sox30Q8CGW4 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sox30Q8CGW4 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sox30Q8CGW4 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sox30Q8CGW4 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sox30Q8CGW4 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sox30Q8CGW4 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sox30Q8CGW4 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sox30Q8CGW4 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sox30Q8CGW4 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Sox30Q8CGW4 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sox30Q8CGW4 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Sox30Q8CGW4 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Sox30Q8CGW4 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sox30Q8CGW4 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Sox30Q8CGW4 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC16.21■□□□□ 0.19
Sox30Q8CGW4 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sox30Q8CGW4 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sox30Q8CGW4 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Sox30Q8CGW4 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sox30Q8CGW4 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sox30Q8CGW4 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sox30Q8CGW4 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC16.21■□□□□ 0.19
Sox30Q8CGW4 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sox30Q8CGW4 Gm14042-201ENSMUST00000120139 833 ntBASIC16.21■□□□□ 0.19
Sox30Q8CGW4 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sox30Q8CGW4 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC16.21■□□□□ 0.19
Sox30Q8CGW4 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.21■□□□□ 0.19
Sox30Q8CGW4 Gm43935-201ENSMUST00000203569 1050 ntBASIC16.21■□□□□ 0.19
Sox30Q8CGW4 Gm7787-201ENSMUST00000216858 688 ntBASIC16.21■□□□□ 0.19
Sox30Q8CGW4 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Sox30Q8CGW4 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC16.21■□□□□ 0.19
Sox30Q8CGW4 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sox30Q8CGW4 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sox30Q8CGW4 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sox30Q8CGW4 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sox30Q8CGW4 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sox30Q8CGW4 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Sox30Q8CGW4 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
Sox30Q8CGW4 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Sox30Q8CGW4 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Sox30Q8CGW4 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC16.21■□□□□ 0.18
Sox30Q8CGW4 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sox30Q8CGW4 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sox30Q8CGW4 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sox30Q8CGW4 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Sox30Q8CGW4 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Sox30Q8CGW4 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sox30Q8CGW4 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sox30Q8CGW4 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Sox30Q8CGW4 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sox30Q8CGW4 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sox30Q8CGW4 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sox30Q8CGW4 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Sox30Q8CGW4 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sox30Q8CGW4 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.2■□□□□ 0.18
Sox30Q8CGW4 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Sox30Q8CGW4 Gm4691-201ENSMUST00000182339 1000 ntBASIC16.2■□□□□ 0.18
Sox30Q8CGW4 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.2■□□□□ 0.18
Sox30Q8CGW4 Gm37019-201ENSMUST00000192133 2134 ntBASIC16.2■□□□□ 0.18
Sox30Q8CGW4 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC16.2■□□□□ 0.18
Sox30Q8CGW4 Gm2451-201ENSMUST00000199447 999 ntBASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms