Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nup88Q8CEC0 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nup88Q8CEC0 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nup88Q8CEC0 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nup88Q8CEC0 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nup88Q8CEC0 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nup88Q8CEC0 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC17.53■□□□□ 0.4
Nup88Q8CEC0 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC17.53■□□□□ 0.4
Nup88Q8CEC0 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nup88Q8CEC0 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC17.53■□□□□ 0.4
Nup88Q8CEC0 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Nup88Q8CEC0 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC17.53■□□□□ 0.4
Nup88Q8CEC0 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nup88Q8CEC0 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC17.53■□□□□ 0.4
Nup88Q8CEC0 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC17.53■□□□□ 0.4
Nup88Q8CEC0 Gm19164-201ENSMUST00000210667 640 ntBASIC17.53■□□□□ 0.4
Nup88Q8CEC0 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nup88Q8CEC0 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nup88Q8CEC0 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nup88Q8CEC0 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
Nup88Q8CEC0 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Nup88Q8CEC0 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nup88Q8CEC0 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nup88Q8CEC0 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nup88Q8CEC0 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nup88Q8CEC0 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nup88Q8CEC0 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nup88Q8CEC0 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nup88Q8CEC0 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Nup88Q8CEC0 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nup88Q8CEC0 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nup88Q8CEC0 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Nup88Q8CEC0 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nup88Q8CEC0 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nup88Q8CEC0 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nup88Q8CEC0 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nup88Q8CEC0 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nup88Q8CEC0 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
Nup88Q8CEC0 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nup88Q8CEC0 Gm26308-201ENSMUST00000157768 69 ntBASIC17.52■□□□□ 0.4
Nup88Q8CEC0 Gm18489-201ENSMUST00000172565 551 ntBASIC17.52■□□□□ 0.4
Nup88Q8CEC0 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nup88Q8CEC0 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nup88Q8CEC0 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nup88Q8CEC0 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC17.52■□□□□ 0.4
Nup88Q8CEC0 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nup88Q8CEC0 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nup88Q8CEC0 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC17.52■□□□□ 0.4
Nup88Q8CEC0 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nup88Q8CEC0 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
Nup88Q8CEC0 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC17.52■□□□□ 0.39
Nup88Q8CEC0 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nup88Q8CEC0 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nup88Q8CEC0 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nup88Q8CEC0 Grk6-207ENSMUST00000225925 2769 ntBASIC17.51■□□□□ 0.39
Nup88Q8CEC0 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC17.51■□□□□ 0.39
Nup88Q8CEC0 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nup88Q8CEC0 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nup88Q8CEC0 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nup88Q8CEC0 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nup88Q8CEC0 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC17.51■□□□□ 0.39
Nup88Q8CEC0 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC17.51■□□□□ 0.39
Nup88Q8CEC0 Fbxl12-205ENSMUST00000140702 1555 ntBASIC17.51■□□□□ 0.39
Nup88Q8CEC0 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC17.51■□□□□ 0.39
Nup88Q8CEC0 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC17.51■□□□□ 0.39
Nup88Q8CEC0 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nup88Q8CEC0 Gm7286-201ENSMUST00000182691 1007 ntBASIC17.51■□□□□ 0.39
Nup88Q8CEC0 Gm7556-201ENSMUST00000201178 1084 ntBASIC17.51■□□□□ 0.39
Nup88Q8CEC0 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nup88Q8CEC0 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC17.51■□□□□ 0.39
Nup88Q8CEC0 Chchd1-203ENSMUST00000224633 557 ntBASIC17.51■□□□□ 0.39
Nup88Q8CEC0 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nup88Q8CEC0 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC17.51■□□□□ 0.39
Nup88Q8CEC0 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nup88Q8CEC0 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nup88Q8CEC0 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nup88Q8CEC0 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nup88Q8CEC0 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nup88Q8CEC0 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC17.51■□□□□ 0.39
Nup88Q8CEC0 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC17.51■□□□□ 0.39
Nup88Q8CEC0 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nup88Q8CEC0 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nup88Q8CEC0 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Nup88Q8CEC0 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nup88Q8CEC0 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nup88Q8CEC0 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
Nup88Q8CEC0 Gm38318-201ENSMUST00000195769 1706 ntBASIC17.5■□□□□ 0.39
Nup88Q8CEC0 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nup88Q8CEC0 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nup88Q8CEC0 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Nup88Q8CEC0 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Nup88Q8CEC0 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC17.5■□□□□ 0.39
Nup88Q8CEC0 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Nup88Q8CEC0 Gm9682-201ENSMUST00000197505 556 ntBASIC17.5■□□□□ 0.39
Nup88Q8CEC0 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Nup88Q8CEC0 AC154621.1-201ENSMUST00000226155 1119 ntBASIC17.5■□□□□ 0.39
Nup88Q8CEC0 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Nup88Q8CEC0 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nup88Q8CEC0 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Nup88Q8CEC0 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms