Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim52Q8CDV4 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim52Q8CDV4 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim52Q8CDV4 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim52Q8CDV4 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim52Q8CDV4 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim52Q8CDV4 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim52Q8CDV4 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim52Q8CDV4 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trim52Q8CDV4 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trim52Q8CDV4 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trim52Q8CDV4 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim52Q8CDV4 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim52Q8CDV4 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim52Q8CDV4 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim52Q8CDV4 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim52Q8CDV4 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trim52Q8CDV4 Syt7-205ENSMUST00000224135 1557 ntBASIC18.24■□□□□ 0.51
Trim52Q8CDV4 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim52Q8CDV4 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim52Q8CDV4 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
Trim52Q8CDV4 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC18.24■□□□□ 0.51
Trim52Q8CDV4 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim52Q8CDV4 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim52Q8CDV4 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim52Q8CDV4 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim52Q8CDV4 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim52Q8CDV4 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trim52Q8CDV4 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim52Q8CDV4 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Trim52Q8CDV4 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim52Q8CDV4 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Trim52Q8CDV4 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim52Q8CDV4 Gtpbp10-211ENSMUST00000198799 648 ntBASIC18.23■□□□□ 0.51
Trim52Q8CDV4 AC156016.3-201ENSMUST00000228623 344 ntBASIC18.23■□□□□ 0.51
Trim52Q8CDV4 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim52Q8CDV4 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trim52Q8CDV4 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim52Q8CDV4 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim52Q8CDV4 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim52Q8CDV4 BC001981-202ENSMUST00000191393 1545 ntBASIC18.23■□□□□ 0.51
Trim52Q8CDV4 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim52Q8CDV4 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Trim52Q8CDV4 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC18.22■□□□□ 0.51
Trim52Q8CDV4 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim52Q8CDV4 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trim52Q8CDV4 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim52Q8CDV4 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim52Q8CDV4 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC18.22■□□□□ 0.51
Trim52Q8CDV4 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim52Q8CDV4 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim52Q8CDV4 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim52Q8CDV4 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC18.22■□□□□ 0.51
Trim52Q8CDV4 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim52Q8CDV4 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
Trim52Q8CDV4 Gm10275-202ENSMUST00000168697 495 ntBASIC18.22■□□□□ 0.51
Trim52Q8CDV4 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trim52Q8CDV4 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim52Q8CDV4 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC18.22■□□□□ 0.51
Trim52Q8CDV4 Mir125a-201ENSMUST00000083545 68 ntBASIC18.22■□□□□ 0.51
Trim52Q8CDV4 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC18.22■□□□□ 0.51
Trim52Q8CDV4 Gm10275-201ENSMUST00000092620 635 ntBASIC18.22■□□□□ 0.51
Trim52Q8CDV4 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim52Q8CDV4 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC18.22■□□□□ 0.51
Trim52Q8CDV4 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Trim52Q8CDV4 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Trim52Q8CDV4 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim52Q8CDV4 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim52Q8CDV4 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim52Q8CDV4 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim52Q8CDV4 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim52Q8CDV4 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim52Q8CDV4 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trim52Q8CDV4 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim52Q8CDV4 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC18.21■□□□□ 0.51
Trim52Q8CDV4 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Trim52Q8CDV4 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Trim52Q8CDV4 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim52Q8CDV4 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim52Q8CDV4 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim52Q8CDV4 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim52Q8CDV4 AC140375.2-201ENSMUST00000225283 584 ntBASIC18.21■□□□□ 0.51
Trim52Q8CDV4 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trim52Q8CDV4 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Trim52Q8CDV4 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC18.21■□□□□ 0.51
Trim52Q8CDV4 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim52Q8CDV4 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim52Q8CDV4 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim52Q8CDV4 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC18.21■□□□□ 0.51
Trim52Q8CDV4 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trim52Q8CDV4 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trim52Q8CDV4 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC18.21■□□□□ 0.51
Trim52Q8CDV4 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Trim52Q8CDV4 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Trim52Q8CDV4 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Trim52Q8CDV4 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Trim52Q8CDV4 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Trim52Q8CDV4 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim52Q8CDV4 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Trim52Q8CDV4 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms